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Read/write microplate and picklist data for lab automation

Project description

Plateo (pronounced Plato, like the planet) is a Python library to assist in the planning, running and checking of laboratory experiments involving microplates.

It can be used to:

  • Read and write robotic protocols (picklists) in different formats to accomodate different liquid dispensers (Tecan EVO, Labcyte Echo).

  • Simulate liquid dispensing runs, taking into account the capacity and dead volume of each container, to predict the maps of future plates.

  • Parse plate data from common laboratory robots (for kinetic experiments, fragment analysis, qPCR, etc.)

  • Export plate information in various formats (graphics, spreadsheets, HTML, JSON, etc.).

Infos

PIP installation:

pip install plateo

Web documentation:

https://edinburgh-genome-foundry.github.io/Plateo/

Github Page:

https://github.com/Edinburgh-Genome-Foundry/Plateo

Live demo:

https://cuba.genomefoundry.org/create_assembly_picklists

License: MIT, Copyright Edinburgh Genome Foundry

More biology software

https://raw.githubusercontent.com/Edinburgh-Genome-Foundry/Edinburgh-Genome-Foundry.github.io/master/static/imgs/logos/egf-codon-horizontal.png

Plateo is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.

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