A Python package for extracting protein sequence features
Project description
A Python package for extracting protein sequence features
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protlearn is a Python package for the feature extraction of amino acid sequences. It is comprised of three stages - preprocessing, feature computation, and subsequent dimensionality reduction. Currently, the package is being maintained for Python versions 3.6, 3.7, and 3.8.
Overview
For more information on how to use it, please refer to the documentation.
Installation
Dependencies
- NumPy
- Pandas
- scikit-learn
- xgboost
- mlxtend
- biopython
User Installation
PyPI
You can install protlearn with pip:
$ pip install protlearn
Conda
You can install protlearn with conda:
$ conda install -c conda-forge protlearn
Authors
This package is maintained by Thomas Dorfer.
License
This package is licensed under the MIT License.
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