Skip to main content

A Python package to download PDFs from OA publications in PubMed. The underlying code is forked from https://github.com/billgreenwald/Pubmed-Batch-Download. Downloaded files are located by default in your personal folder under the ‘pubmed2pdf’ directory.

Installation

pubmed2pdf can be installed from PyPI with the following command in your terminal:

$ python3 -m pip install pubmed2pdf

The latest code can be installed from GitHub with:

$ python3 -m pip install git+https://github.com/ddomingof/PubMed2PDF.git

For developers, the code can be installed with:

$ git clone https://github.com/ddomingof/PubMed2PDF.git
$ cd PubMed2PDF
$ python3 -m pip install -e .

How to Use

PubMed2PDF works by simply typing the list of PubMed identifiers in your command line interface or reading them from a file.

Example from file:

$ python3 -m pubmed2pdf pdf --pmidsfile="/my/path/to/the/file"
$ python3 -m pubmed2pdf pdf --pmids="123, 1234, 12345"

Run the help command to see all functionalities

$ python3 -m pubmed2pdf pdf --help

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pubmed2pdf-0.0.7.tar.gz (7.4 kB view details)

Uploaded Source

File details

Details for the file pubmed2pdf-0.0.7.tar.gz.

File metadata

  • Download URL: pubmed2pdf-0.0.7.tar.gz
  • Upload date:
  • Size: 7.4 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/5.0.0 CPython/3.9.18

File hashes

Hashes for pubmed2pdf-0.0.7.tar.gz
Algorithm Hash digest
SHA256 4a332bd416c99858b5883587f34c80030861c20d2dc90ebb2c76e2388b81990b
MD5 6ec13f08ca146433eb827fa25822d3a1
BLAKE2b-256 3cb1b49dd54f22cd700355adb61e7c43124fcf114c8c933074756c75cd8c080e

See more details on using hashes here.

Release history Release notifications | RSS feed

This release

0.0.7 This release

1 file

0.0.6

1 file

0.0.4

1 file

0.0.3

1 file

0.0.2

1 file

0.0.1

1 file

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page