A Python package to download PDFs from OA publications in PubMed. The underlying code is forked from https://github.com/billgreenwald/Pubmed-Batch-Download. Downloaded files are located by default in your personal folder under the ‘pubmed2pdf’ directory.
Installation
pubmed2pdf can be installed from PyPI with the following command in your terminal:
$ python3 -m pip install pubmed2pdf
The latest code can be installed from GitHub with:
$ python3 -m pip install git+https://github.com/ddomingof/PubMed2PDF.git
For developers, the code can be installed with:
$ git clone https://github.com/ddomingof/PubMed2PDF.git
$ cd PubMed2PDF
$ python3 -m pip install -e .
How to Use
PubMed2PDF works by simply typing the list of PubMed identifiers in your command line interface or reading them from a file.
Example from file:
$ python3 -m pubmed2pdf pdf --pmidsfile="/my/path/to/the/file"
$ python3 -m pubmed2pdf pdf --pmids="123, 1234, 12345"
Run the help command to see all functionalities
$ python3 -m pubmed2pdf pdf --help
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
File details
Details for the file pubmed2pdf-0.0.7.tar.gz.
File metadata
- Download URL: pubmed2pdf-0.0.7.tar.gz
- Upload date:
- Size: 7.4 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/5.0.0 CPython/3.9.18
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
4a332bd416c99858b5883587f34c80030861c20d2dc90ebb2c76e2388b81990b
|
|
| MD5 |
6ec13f08ca146433eb827fa25822d3a1
|
|
| BLAKE2b-256 |
3cb1b49dd54f22cd700355adb61e7c43124fcf114c8c933074756c75cd8c080e
|