Pyomic

Pyomic is the fundamental package for multi omics included bulk and single cell analysis with Python.

Directory structure

.
├── Pyomic                  # Main Python package
├── pyomic_guide            # Documentation files
├── sample                  # Some test data
├── LICENSE
└── README.md

Where to get it

Binary installers for the latest released version are available at the pypi

pip install -U Pyomic

Usage

Please checkout the documentations and tutorials at pyomic.readthedocs.io.

Reference

[1] dynamicTreeCut was originally published by in Bioinformatics
[2] scDrug was originally published in Computational and Structural Biotechnology Journal
[3] MOFA was originally published in Genome Biology
[4] COSG was originally published in Briefings in Bioinformatics
[5] CellphoneDB was originally published in Nature
[6] AUCell was originally available in Bioconductor, and we use the script of Pyscenic to instead.
[7] Bulk2Space was originally available in Nature Communications
[8] SCSA was originally availabale in Front Genet
[9] WGCNA was originally avaliable in BMC Bioinformatics
[10] VIA was originally avaliable in Nature Communications

Contact

Zehua Zeng (starlitnightly@163.com)

Other

Logo made by DesignEvo free logo creator

Release files for Pyomic 1.2.9

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Built distribution (wheel)

Table of built distributions (wheels) for Pyomic 1.2.9
File	Interpreter	ABI	Platform	Reset
Pyomic-1.2.9-py3-none-any.whl 16.1 MB May 7, 2023	Python 3	none	any	Details

Release files / Pyomic-1.2.9-py3-none-any.whl

Download URL	Pyomic-1.2.9-py3-none-any.whl
Size	16.1 MB
Tags	Python 3
SHA-256 checksum How to use checksums	`e278ef366509947b7a304ea424a8ad9741c50694c8b61a15e0d62f8737db4ed7`
BLAKE2b-256 checksum How to use checksums	`b4afc91bfe77afa647a1725084d9644b64998e4b904cc03d5d2b30b87eeee0f6`
Upload date	May 7, 2023
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/4.0.2 CPython/3.8.13`