Job running time statistics for PyPPL
Project description
pyppl_jobtime
Job running time statistics for PyPPL.
Installation
Require R
and ggplot2
.
pip install pyppl_jobtime
Enable it with PyPPL
:
- In configuration file:
default: _plugins: - pyppl_jobtime # ... other configurations
Then a file named job.time
will be created in each job directory with running time in seconds saved in it.
Plotting the running time profile
pyppl jobtime -proc pVcfFix -outfile profile.png
-
Using violin plot:
pyppl jobtime -proc pVcfFix -outfile violin.png -plottype violin
-
Changing process names:
pyppl jobtime -proc pVcfFix -outfile violin.png -plottype violin
Project details
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