pyriandx

Pull Request Build Status

pyriandx is CLI client and Python SDK/Library for PierianDx Clinical Genomics Workspace (CGW) web services -- https://umccr.github.io/pyriandx/

TL;DR

Install through pip like so
```
pip install pyriandx
```

Export PDX_ environment variables

export PDX_USERNAME=<YOUR_PierianDx_CGW_LOGIN_EMAIL>
export PDX_PASSWORD=<YOUR_PierianDx_CGW_LOGIN_PASSWORD>
export PDX_INSTITUTION=<ASK_YOUR_PierianDx_CGW_ACCOUNT_MANAGER>
export PDX_BASE_URL=https://app.pieriandx.com/cgw-api/v2.0.0

Print CLI command help

pyriandx version
pyriandx help
pyriandx case help
pyriandx list help
pyriandx create help
pyriandx upload help
pyriandx run help
pyriandx job help
pyriandx poll help
pyriandx report help

More examples/tutorials available at User Guide

License

MIT License and DISCLAIMER

Development Status
- 5 - Production/Stable
Operating System
- OS Independent
Programming Language
- Python :: 3

Metadata

Development Status
- 5 - Production/Stable
Operating System
- OS Independent
Programming Language
- Python :: 3

Release files for pyriandx 0.4.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for pyriandx 0.4.0
File	Size	Uploaded
pyriandx-0.4.0.tar.gz	16.2 kB	Mar 5, 2026	Details

Built distribution (wheel)

Table of built distributions (wheels) for pyriandx 0.4.0
File	Interpreter	ABI	Platform	Reset
pyriandx-0.4.0-py3-none-any.whl 15.3 kB Mar 5, 2026	Python 3	none	any	Details

Total release size: 31.5 kB

Release files / pyriandx-0.4.0.tar.gz

Download URL	pyriandx-0.4.0.tar.gz
Size	16.2 kB
Tags	Source
SHA-256 checksum How to use checksums	`be9485a14fd77a6d17d276d241af0684d159721505fa583e5802b5d716439464`
BLAKE2b-256 checksum How to use checksums	`f01e91135e877805d526df0215a507709616f257e4346f7b8f1747fe5f4ad01e`
Upload date	Mar 5, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.8.0 pkginfo/1.12.1.2 readme-renderer/44.0 requests/2.32.5 requests-toolbelt/1.0.0 urllib3/2.6.3 tqdm/4.67.3 importlib-metadata/8.7.1 keyring/25.7.0 rfc3986/2.0.0 colorama/0.4.6 CPython/3.14.3`

Release files / pyriandx-0.4.0-py3-none-any.whl

Download URL	pyriandx-0.4.0-py3-none-any.whl
Size	15.3 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`f123f6e099171771796272c09921dba7d020c7cefa233ea13f106ae397c227e6`
BLAKE2b-256 checksum How to use checksums	`4c833fa6c6a28ba55e93fba1fe7ed87fc20530b655c349138382e510ee96ee91`
Upload date	Mar 5, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.8.0 pkginfo/1.12.1.2 readme-renderer/44.0 requests/2.32.5 requests-toolbelt/1.0.0 urllib3/2.6.3 tqdm/4.67.3 importlib-metadata/8.7.1 keyring/25.7.0 rfc3986/2.0.0 colorama/0.4.6 CPython/3.14.3`