pysettrie
pysettrie is a high-performance Cython Python 3 library for efficient storage and querying of collections of sets using the set-trie data structure. It supports fast superset and subset search over large collections — far faster than naive iteration.
- GitHub: https://github.com/GregoryMorse/pysettrie
- PyPI: https://pypi.org/project/pysettrie/
- Maintainer: Gregory Morse <gregory.morse@live.com>
Features
- Fast superset/subset queries over a stored collection of sets
- Three container types covering set-only, key→value, and key→multiple-values use cases
- Core algorithms implemented in Cython with C++ internals for maximum performance
- Pure Python fallback interface; drop-in for dict-of-sets workflows
- Fully unit-tested
Installation
pip install pysettrie
Note: A C++ compiler is required to build from source (the PyPI wheel is pre-built for common platforms). On Ubuntu you may need
sudo apt-get install build-essentialif building from source.
Containers
| Class | Description |
|---|---|
SetTrie |
Set-trie container for a collection of sets. Supports fast superset/subset queries. |
SetTrieMap |
Mapping container with sets as keys. Like SetTrie but associates a single value with each key set. |
SetTrieMultiMap |
Like SetTrieMap but allows multiple values per key set. |
Quick Start
from settrie import SetTrie, SetTrieMap, SetTrieMultiMap
# --- SetTrie ---
t = SetTrie([{1, 3}, {1, 3, 5}, {1, 4}, {1, 2, 4}, {2, 4}, {2, 3, 5}])
t.contains({1, 3}) # True
t.hassuperset({3, 5}) # True — is there any stored set that is a superset of {3,5}?
t.supersets({3, 5}) # [{1, 3, 5}, {2, 3, 5}]
t.hassubset({1, 2, 3}) # True — is there any stored set that is a subset of {1,2,3}?
t.subsets({1, 2, 4}) # [{1, 2, 4}, {1, 4}, {2, 4}]
t.add({6, 7})
t.remove({1, 4})
# --- SetTrieMap ---
m = SetTrieMap()
m.assign({1, 2}, 'a')
m.assign({1, 2, 3}, 'b')
m.assign({3, 4}, 'c')
m.get({1, 2}) # 'a'
m.supersets({1}) # [({1, 2}, 'a'), ({1, 2, 3}, 'b')]
m.subsets({1, 2, 3, 4}) # [({1, 2}, 'a'), ({1, 2, 3}, 'b'), ({3, 4}, 'c')]
# --- SetTrieMultiMap ---
mm = SetTrieMultiMap()
mm.assign({1, 2}, 'x')
mm.assign({1, 2}, 'y') # second value for same key
mm.get({1, 2}) # ['x', 'y']
Background
pysettrie implements the set-trie data structure described in:
I. Savnik: Index data structure for fast subset and superset queries. CD-ARES, IFIP LNCS, 2013.
http://osebje.famnit.upr.si/~savnik/papers/cdares13.pdf
Notes on the paper:
- Algorithm 1 does not mention sorting children during insert (line 5 should do a sorted insert).
- Algorithm 4 is incorrect and will always return false; line 7 should read: "for (each child of node labeled l: word.currentElement ≤ l) & (while not found) do"
- The descriptions of
getAllSubSetsandgetAllSuperSetsare wrong and would not produce all sub/supersets.
See also:
- https://stackoverflow.com/questions/9353100/quickly-checking-if-set-is-superset-of-stored-sets
- https://stackoverflow.com/questions/1263524/superset-search
Performance
The original pure-Python settrie module was rewritten entirely in Cython with C++ (std::set, std::vector, std::stack) underlying data structures. This yields significantly faster insertion, lookup, and query performance compared to the pure-Python implementation, especially for large collections.
Running Tests
python -m pytest tests/
Changelog
Version 1.0.3
- Switch to GitHub Actions CI; update README and badges.
Version 1.0.2
- Continuous integration, remove unnecessary files, improve build requirements.
Version 1.0.0
- Complete Cython rewrite for improved performance; bug fixes.
Version 0.1.3 (original pure-Python release by Márton Miháltz)
SetTrieMultiMap.assign()returns number of values associated to key after assignment.
Authors
- Gregory Morse <gregory.morse@live.com> — Cython rewrite, current maintainer
GitHub: GregoryMorse - Márton Miháltz — Original pure-Python implementation
https://sites.google.com/site/mmihaltz/
License
Licensed under the GNU Lesser General Public License v3 (LGPLv3).
1 maintainer
Metadata
1 maintainer
Release files for pysettrie 1.0.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
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|---|---|---|---|
| pysettrie-1.0.3.tar.gz | 150.4 kB | Details |
Built distributions (wheels)
Total release size: 24.0 MB
Release files / pysettrie-1.0.3.tar.gz
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