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Analyzing microbiome abundance data to infer deep structures

Project description

qbiome PyPI Downloads
qbiome curent version
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Info:Draft link will be posted here
Author:ZeD@UChicago <zed.uchicago.edu>
Description:Application of quasinets (https://pypi.org/project/quasinet/) for microbiome analysis for learning rules of organization, maturation, competition and succession in microbiome ecosystems.
Documentation:https://zeroknowledgediscovery.github.io/qbiome/qbiome/index.html

Usage:

import qbiome
from qbiome.data_formatter import DataFormatter
from qbiome.quantizer import Quantizer
from qbiome.qnet_orchestrator import QnetOrchestrator
from qbiome.forecaster import Forecaster
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