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Beautiful raincloud plots for Python

Project description

raincloudpy 🌧️☁️

PyPI version License: MIT Python 3.7+

Beautiful raincloud plots for Python, combining boxplots, half-violin plots, and density-aligned scatter plots to create comprehensive and visually appealing data visualizations.

What is a Raincloud Plot?

Raincloud plots are a hybrid visualization that combines:

  • 📊 Box plots - showing quartiles and outliers
  • 🎻 Half-violin plots - displaying the probability density
  • 🔴 Scatter plots - showing individual data points aligned by density

This creates a "rain cloud" effect that provides maximum information about your data distribution.

Example

raincloud plot

Installation

pip install raincloudpy

Quick Start

basic

import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
from raincloudpy import raincloudplot
import seaborn as sns

# Set random seed for reproducibility
np.random.seed(42)

# Create sample data
df = pd.DataFrame({
    'group': ['A'] * 50 + ['B'] * 50 + ['C'] * 50,
    'value': np.concatenate([
        np.random.randn(50) + 2,
        np.random.randn(50) + 3,
        np.random.randn(50) + 2.5
    ])
})

# Create raincloud plot
# fig, ax = plt.subplots(figsize=(10, 6))
plt.figure(figsize=(10, 6))
sns.set_context('talk')
raincloudplot(data=df, x='group', y='value', palette='Set2')
plt.title('basic raincloud plot example')
plt.ylabel('value')
plt.xlabel('group')
plt.tight_layout()
plt.show()

advanced

import numpy as np
import pandas as pd
import matplotlib.pyplot as plt

import seaborn as sns

# Set random seed for reproducibility
np.random.seed(42)

# Create sample data mimicking value comparison
N = 150
df_fit = pd.DataFrame({
    'group': ['group 1'] * N + ['group 2'] * N + ['group 3'] * N,
    'value': np.concatenate([
        np.random.normal(loc=300, scale=20, size=N),
        np.random.normal(loc=250, scale=20, size=N),
        np.random.normal(loc=200, scale=20, size=N)
    ])
})

sns.set_style("ticks")
sns.set_context("notebook")

# Create customized raincloud plot
plt.figure(figsize=(6, 5), dpi=300)
raincloudplot(
    data=df_fit, 
    x='group', 
    y='value',
    order=['group 1', 'group 2', 'group 3'],
    palette=['#3498db', '#e74c3c', '#2ecc71'],
    box_width=0.14,
    violin_width=0.4,
    dot_size=10,
    dot_spacing=0.04,
    y_threshold=3,
    box_kwargs={'linewidth': 3},
    scatter_kwargs={'alpha': 0.9, 'edgecolor': 'black', 'linewidth': 0.5},
    violin_kwargs={'alpha': 0.25},
)


plt.title('group comparison using raincloudpy', fontweight='bold')
plt.ylabel('value')
plt.xlabel('')
plt.tight_layout()
sns.despine(offset=10, trim=True, bottom=True)
plt.tick_params(axis='x', which='both', bottom=False, top=False)
plt.show()

Hiding Components

# Only show violin and scatter
raincloudplot(
    data=df, 
    x='group', 
    y='value',
    show_box=False,
    show_violin=True,
    show_scatter=True
)

Features

  • 🎨 Customizable colors - Use any seaborn color palette or custom colors
  • 📏 Flexible sizing - Control box width, violin width, and dot sizes
  • 🎯 Density-aligned scatter - Points are intelligently positioned based on data density
  • 🔧 Component control - Show/hide individual components (box, violin, scatter)
  • 📊 Works with pandas - Seamless integration with pandas DataFrames
  • 🎭 Matplotlib-based - Fully compatible with matplotlib customization

Parameters

Parameter Type Default Description
data DataFrame None Input data (required)
x str None Column name for categorical variable
y str None Column name for continuous variable
order list None Order to plot categorical levels
palette str/list None Colors for different groups
ax Axes None Matplotlib axes object
box_width float 0.15 Width of boxplot boxes
violin_width float 0.3 Maximum width of violin plot
dot_size float 7 Size of scatter points
dot_spacing float 0.03 Horizontal spacing between dots
y_threshold float None Threshold for grouping y-values (absolute); 5% when set to None
n_bins int 40 Number of bins for density estimation
box_kwargs dict None Additional boxplot arguments
violin_kwargs dict None Additional violin plot arguments
scatter_kwargs dict None Additional scatter plot arguments
show_box bool True Whether to show boxplot
show_violin bool True Whether to show violin plot
show_scatter bool True Whether to show scatter plot
orient str 'v' Plot orientation ('v' or 'h')

Requirements

  • Python >= 3.7
  • numpy >= 1.19.0
  • matplotlib >= 3.3.0
  • scipy >= 1.5.0
  • pandas >= 1.1.0
  • seaborn >= 0.11.0

Contributing

Contributions are welcome! Please feel free to submit a Pull Request.

License

This project is licensed under the MIT License - see the LICENSE file for details.

Citation

If you use this package in your research, please cite:

@software{raincloudpy2025,
  author = {Basile Garcia},
  title = {raincloudpy: Beautiful raincloud plots for Python},
  year = {2025},
  url = {https://github.com/bsgarcia/raincloudpy}
}

Acknowledgments

Inspired by the original raincloud plots concept and various implementations in R and Python.

References

  • Allen, M., Poggiali, D., Whitaker, K., Marshall, T. R., & Kievit, R. A. (2019). Raincloud plots: a multi-platform tool for robust data visualization. Wellcome Open Research, 4.

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