Python client for Reactome content and analysis service API calls.
Project description
Reactome2py
| CI | Branch | Build Status |
|---|---|---|
| Travis | master |  |
Python client for Reactome content and analysis services API calls.
Installation
-
PyPI install using pip
(sudo) pip install reactome2py -
from source
git clone repo cd reactome2py python setup.py install
-
Dockerfile
(sudo) docker build -t <tag-name>:latest . (sudo) docker run -it --rm <tag-name>:latest
reactome2py Jupyter notebook use-case examples
demo folder holds jupyter notebooks to show use-cases:
API Documentation and json structures (Model section)
- Pathway Analysis Service: https://reactome.org/AnalysisService/#/
- Content Service: https://reactome.org/ContentService/#/
Reactome Pathway Browser Tour
This video is useful in understanding how to fully use and interpret Reactome pathway browser features.
https://www.youtube.com/watch?v=-skixrvI4nU
In depth user guides are available at: https://reactome.org/userguide
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distributions
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file reactome2py-3.0.0-py3-none-any.whl.
File metadata
- Download URL: reactome2py-3.0.0-py3-none-any.whl
- Upload date:
- Size: 26.4 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.3.0 pkginfo/1.6.1 requests/2.24.0 setuptools/50.3.1.post20201107 requests-toolbelt/0.9.1 tqdm/4.50.2 CPython/3.8.5
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
e1d71360465f7c13643438ce0e709487778accdf77062cdfc71abef7c3dfacf1
|
|
| MD5 |
6797168751d7af94786c666380ca74fd
|
|
| BLAKE2b-256 |
611cfb143b20246a5bc7ed90210dc96a17f1c716ae3cce016c25349e685020d8
|
