Resolwe SDK for Python supports interaction with Resolwe server and its extension Resolwe Bioinformatics. You can use it to upload and inspect biomedical data sets, contribute annotations, run analysis, and write pipelines.
Docs & Help
Read the detailed description in documentation.
Install
Install from PyPI:
pip install resdk
If you would like to contribute to the SDK codebase, follow the installation steps for developers.
Quick Start
In this showcase we will download the aligned reads and their index (BAM and BAI) from the server:
import resdk
# Create a Resolwe object to interact with the server
res = resdk.Resolwe(url='https://app.genialis.com')
# Enable verbose logging to standard output
resdk.start_logging()
# Get sample meta-data from the server
sample = res.sample.get('resdk-example')
# Download files associated with the sample
sample.download()Both files (BAM and BAI) have downloaded to the working directory. Check them out. To learn more about the Resolwe SDK continue with Getting started.
If you do not have access to the Resolwe server, contact us at info@genialis.com.
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Metadata
4 maintainers
Release files for resdk 22.2.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| resdk-22.2.3.tar.gz | 273.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| resdk-22.2.3-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 372.3 kB
Release files / resdk-22.2.3.tar.gz
| Download URL | resdk-22.2.3.tar.gz |
|---|---|
| Size | 273.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.8
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
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Signed by GitHub Actions, verified by PyPI on Feb 18, 2026.
Transparency logRelease files / resdk-22.2.3-py3-none-any.whl
| Download URL | resdk-22.2.3-py3-none-any.whl |
|---|---|
| Size | 99.0 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
d1c73afe0d7a141ee1433f4ba58d5534a1d574aa397942b9d7303b475d6e91b0
|
|
BLAKE2b-256 checksum How to use checksums |
e9dc2c8473ab7a1f386ecedcf78c42cb8b22e9d2bf52b523bc547f38bdc7d662
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.8
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Feb 18, 2026.
Transparency log
