Bioinformatics pipelines for the Resolwe platform
Read about getting started and how to write
processes in the documentation.
To chat with developers or ask for help, join us on Slack.
Resolwe requires PostgreSQL (9.4+). Many Linux distributions already include the required version of PostgreSQL (e.g. Fedora 22+, Debian 8+, Ubuntu 15.04+) and you can simply install it via distribution’s package manager. Otherwise, follow these instructions.
The preferred way to install the C compiler and Python and PostgreSQL development files is to use your distribution’s packages, if they exist. For example, on a Fedora/RHEL-based system, that would mean installing gcc, python-devel/python3-devel and postgresql-devel packages.
pip install resolwe-bio
pip install https://github.com/genialis/resolwe-bio/archive/<git-tree-ish>.tar.gz
where <git-tree-ish> can represent any commit SHA, branch name, tag name, etc. in Resolwe Bioinformatics’ GitHub repository. For example, to install the latest Resolwe Bioinformatics from the master branch, use:
pip install https://github.com/genialis/resolwe-bio/archive/master.tar.gz
We welcome new contributors. To learn more, read Contributing section of the documentation.
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
|File Name & Checksum SHA256 Checksum Help||Version||File Type||Upload Date|
|resolwe_bio-1.4.1-py2.py3-none-any.whl (290.8 kB) Copy SHA256 Checksum SHA256||py2.py3||Wheel||Jul 20, 2017|
|resolwe-bio-1.4.1.tar.gz (9.4 MB) Copy SHA256 Checksum SHA256||–||Source||Jul 20, 2017|