Bioinformatics pipelines for the Resolwe platform
Docs & Help
Read about getting started and how to write processes in the documentation.
To chat with developers or ask for help, join us on Slack.
Resolwe requires PostgreSQL (9.4+). Many Linux distributions already include the required version of PostgreSQL (e.g. Fedora 22+, Debian 8+, Ubuntu 15.04+) and you can simply install it via distribution’s package manager. Otherwise, follow these instructions.
The preferred way to install the C compiler and Python development files is to use your distribution’s packages, if they exist. For example, on a Fedora/RHEL-based system, that would mean installing gcc and python3-devel packages.
pip install resolwe-bio
To install a pre-release, use:
pip install --pre resolwe-bio
Using source on GitHub
pip install --pre https://github.com/genialis/resolwe-bio/archive/<git-tree-ish>.tar.gz
where <git-tree-ish> can represent any commit SHA, branch name, tag name, etc. in Resolwe Bioinformatics’ GitHub repository. For example, to install the latest Resolwe Bioinformatics from the master branch, use:
pip install --pre https://github.com/genialis/resolwe-bio/archive/master.tar.gz
We welcome new contributors. To learn more, read Contributing section of the documentation.
Release history Release notifications
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
|Filename, size & hash SHA256 hash help||File type||Python version||Upload date|
|resolwe_bio-10.0.0-py3-none-any.whl (358.7 kB) Copy SHA256 hash SHA256||Wheel||py3||Jun 20, 2018|
|resolwe-bio-10.0.0.tar.gz (10.5 MB) Copy SHA256 hash SHA256||Source||None||Jun 20, 2018|