Bioinformatics pipelines for the Resolwe platform
Docs & Help
Read about getting started and how to write processes in the documentation.
To chat with developers or ask for help, join us on Slack.
Resolwe requires PostgreSQL (9.4+). Many Linux distributions already include the required version of PostgreSQL (e.g. Fedora 22+, Debian 8+, Ubuntu 15.04+) and you can simply install it via distribution’s package manager. Otherwise, follow these instructions.
The preferred way to install the C compiler and Python and PostgreSQL development files is to use your distribution’s packages, if they exist. For example, on a Fedora/RHEL-based system, that would mean installing gcc, python-devel/python3-devel and postgresql-devel packages.
pip install resolwe-bio
Using source on GitHub
pip install https://github.com/genialis/resolwe-bio/archive/<git-tree-ish>.tar.gz
where <git-tree-ish> can represent any commit SHA, branch name, tag name, etc. in Resolwe Bioinformatics’ GitHub repository. For example, to install the latest Resolwe Bioinformatics from the master branch, use:
pip install https://github.com/genialis/resolwe-bio/archive/master.tar.gz
We welcome new contributors. To learn more, read Contributing section of the documentation.
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
|File Name & Checksum SHA256 Checksum Help||Version||File Type||Upload Date|
|resolwe_bio-5.0.1-py2.py3-none-any.whl (320.2 kB) Copy SHA256 Checksum SHA256||py2.py3||Wheel||Nov 14, 2017|
|resolwe-bio-5.0.1.tar.gz (10.1 MB) Copy SHA256 Checksum SHA256||–||Source||Nov 14, 2017|