This is a pre-production deployment of Warehouse, however changes made here WILL affect the production instance of PyPI.
Latest Version Dependencies status unknown Test status unknown Test coverage unknown
Project Description

Bioinformatics pipelines for the Resolwe dataflow package for Django framework.

Docs & Help

Read about getting started and how to write processes in the documentation.

To chat with developers or ask for help, join us on Slack.

Install

Prerequisites

Make sure you have Python (2.7 or 3.4+) installed on your system. If you don’t have it yet, follow these instructions.

Resolwe requires PostgreSQL (9.4+). Many Linux distributions already include the required version of PostgreSQL (e.g. Fedora 22+, Debian 8+, Ubuntu 15.04+) and you can simply install it via distribution’s package manager. Otherwise, follow these instructions.

Additionally, installing the psycopg2 dependency from PyPI will require having a C compiler (e.g. GCC) as well as Python and PostgreSQL development files installed on the system.

Note

The preferred way to install the C compiler and Python and PostgreSQL development files is to use your distribution’s packages, if they exist. For example, on a Fedora/RHEL-based system, that would mean installing gcc, python-devel/python3-devel and postgresql-devel packages.

From PyPI

pip install resolwe-bio

From source

pip install https://github.com/genialis/resolwe-bio/archive/<git-tree-ish>.tar.gz

where <git-tree-ish> can represent any commit SHA, branch name, tag name, etc. in Resolwe Bioinformatics’ GitHub repository. For example, to install the latest Resolwe Bioinformatics from the master branch, use:

pip install https://github.com/genialis/resolwe-bio/archive/master.tar.gz

Contribute

We welcome new contributors. To learn more, read Contributing section of the documentation.

Release History

Release History

1.2.1

This version

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

1.2.0

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

1.1.0

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

1.0.0

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

Download Files

Download Files

TODO: Brief introduction on what you do with files - including link to relevant help section.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
resolwe_bio-1.2.1-py2.py3-none-any.whl (199.0 kB) Copy SHA256 Checksum SHA256 py2.py3 Wheel Jul 27, 2016
resolwe-bio-1.2.1.tar.gz (2.0 MB) Copy SHA256 Checksum SHA256 Source Jul 27, 2016

Supported By

WebFaction WebFaction Technical Writing Elastic Elastic Search Pingdom Pingdom Monitoring Dyn Dyn DNS HPE HPE Development Sentry Sentry Error Logging CloudAMQP CloudAMQP RabbitMQ Heroku Heroku PaaS Kabu Creative Kabu Creative UX & Design Fastly Fastly CDN DigiCert DigiCert EV Certificate Rackspace Rackspace Cloud Servers DreamHost DreamHost Log Hosting