Skip to main content

Single-Cell Genome-Wide Chromatin Accessibility

Project description

scGCA

Genomewide chromatin accessibility for single-cell data.

Installation

  1. Create a virtual environment
conda create -n scGCA python=3.10 scipy numpy pandas scikit-learn && conda activate scGCA
  1. Install PyTorch following the official instruction.
pip3 install torch torchvision --index-url https://download.pytorch.org/whl/cu126
  1. Install scGCA
pip3 install scGCA

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

scgca-0.0.1.tar.gz (22.5 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

scgca-0.0.1-py3-none-any.whl (23.6 kB view details)

Uploaded Python 3

File details

Details for the file scgca-0.0.1.tar.gz.

File metadata

  • Download URL: scgca-0.0.1.tar.gz
  • Upload date:
  • Size: 22.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.10.18

File hashes

Hashes for scgca-0.0.1.tar.gz
Algorithm Hash digest
SHA256 9fcee4e9941059375538f4500b26e47707dba31839d79ccbd34215a6396f6232
MD5 ecb9daa6f18606eb020d06152ef93115
BLAKE2b-256 6f74dcade59ea72cd299c45806cd2311027b1e6f75e79c407006c840838320f3

See more details on using hashes here.

File details

Details for the file scgca-0.0.1-py3-none-any.whl.

File metadata

  • Download URL: scgca-0.0.1-py3-none-any.whl
  • Upload date:
  • Size: 23.6 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.10.18

File hashes

Hashes for scgca-0.0.1-py3-none-any.whl
Algorithm Hash digest
SHA256 94624b6a9feb7775af459181bd9e41f625c6115f31eac14d2ad6ad968788b91a
MD5 a2f1c0a46b73470a26704e5b69e356c8
BLAKE2b-256 42f48985bc27037340767353545d01344173cfb5f7f0ce39b1750bd168271bf1

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page