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Single-Cell Genome-Wide Chromatin Accessibility

Project description

scGCA

Genomewide chromatin accessibility for single-cell data.

Installation

  1. Create a virtual environment
conda create -n scGCA python=3.10 scipy numpy pandas scikit-learn && conda activate scGCA
  1. Install PyTorch following the official instruction.
pip3 install torch torchvision --index-url https://download.pytorch.org/whl/cu126
  1. Install scGCA
pip3 install scGCA

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