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A package to decipher the drug-responsive tumor cell state dynamics by modeling single-cell level expression changes

Project description

scStateDynamics

Introduction

scStateDynamics is a computational method to thoroughly decipher the tumor cell state dynamics in response to drug treatment by modeling single-cell level expression changes.

Figure 1

System Requirements

  • Python version: >= 3.7

Installation

The scStateDynamics python package can be installed directly via pip:

pip install scStateDynamics

Tutorial

  • The example data used in this tutorial can be downloaded from here.

  • The step-by-step tutorials are available in the tutorial directory.

Citation

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