scipion-em-xlmtools 1.0.0

Plugin to use xlmtools-Tools programs within the Scipion framework

This plugin provide wrappers around several programs of XLM-Tool.

stable:

devel: |

Installation

You will need to use 3.0 version of Scipion to be able to run these protocols. To install the plugin, you have two options:

1. Stable version (not avalaible yet)

scipion installp -p scipion-em-xlmtools

2. Developer’s version

   • download repository

   git clone https://github.com/scipion-em/scipion-em-xlmtools.git

   • install

   scipion installp -p path_to_scipion-em-xlmtools --devel

XML-Tools binaries will be installed automatically with the plugin.

To check the installation, simply run one of the following Scipion tests:

scipion3 tests xlmtools.tests.test_protocols_xlm.TestWLM

A complete list of tests can also be seen by executing scipion test --show --grep xlmtools

Supported versions

• 1.0

Protocols

• XLM Tools protocol

References

1. Sinnott et al., Combining Information from Crosslinks and Monolinks in the Modeling of Protein Structures, Sturcture (2020), https://doi.org/10/1016/j.str.2020.05.012