scitex-bridge 0.1.9

Cross-module adapters: scitex.stats ↔ matplotlib annotations, scitex.stats ↔ vis FigureModel, scitex.plt ↔ vis — standalone module from the SciTeX ecosystem

scitex-bridge

Cross-module adapters between scitex.stats / matplotlib / vis-FigureModel.

Full Documentation · pip install scitex-bridge

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Installation

pip install scitex-bridge

Quick Start

import scitex_bridge as br

1 Interfaces

Python API

import scitex_bridge as br

# Add stats results to either backend (auto-detects)
br.add_stats_from_results(target, stat_results, format_style="asterisk")

# Stats → matplotlib annotation
br.add_stat_to_axes(ax, stat_result)
br.format_stat_for_plot(stat_result, style="asterisk")
br.extract_stats_from_axes(ax)

# Stats → vis (FigureModel)
br.stat_result_to_annotation(stat_result)
br.add_stats_to_figure_model(fig_model, stat_results)
br.position_stat_annotation(fig_model, stat_result, prefer_corner="top-right")

# plt ↔ vis
br.matplotlib_to_figure_model(fig)
br.figure_model_to_matplotlib(fig_model)

# Protocols (Position duck-typing target)
from scitex_bridge import Position

Status

Standalone fork of scitex.bridge. Deps: matplotlib + scipy.

Decoupling notes:

• scitex.io.bundle.kinds._stats.Position → vendored as a tiny dataclass in _compat.py. When scitex (umbrella) is installed, the real Position is preferred so produced objects round-trip cleanly through bundle code paths.
• The optional scitex.io.bundle.kinds._plot._models imports remain inside try/except ImportError so the package works fully standalone.

The umbrella package's scitex.bridge import path is preserved via a sys.modules-alias bridge.

Part of SciTeX

scitex-bridge is part of SciTeX.

Four Freedoms for Research

0. The freedom to run your research anywhere — your machine, your terms.
1. The freedom to study how every step works — from raw data to final manuscript.
2. The freedom to redistribute your workflows, not just your papers.
3. The freedom to modify any module and share improvements with the community.

AGPL-3.0 — because we believe research infrastructure deserves the same freedoms as the software it runs on.

License

AGPL-3.0-only (see LICENSE).

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