Analyze multi-modal single-cell data!

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Project description

scranpy

Fast multi-modal single-cell data analysis! stay tuned...

Developer Notes

Steps to setup dependencies -

initialize git submodules in extern/libscran.
run cmake . inside the extern/knncolle to download the annoy library. a future version of this will use a cmake to setup the extern directory.

First one needs to build the extern library, this would generate a shared object file to src/scranpy/core-[*].so

python setup.py build_ext --inplace

For typical development workflows, run this for tests

python setup.py build_ext --inplace && tox

Note

This project has been set up using PyScaffold 4.5. For details and usage information on PyScaffold see https://pyscaffold.org/.

Project details

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Release history Release notifications | RSS feed

0.1.3

Feb 5, 2024

0.1.3a0 pre-release

Feb 3, 2024

0.1.2

Feb 3, 2024

0.1.1

Jan 4, 2024

0.1.0

Sep 20, 2023

0.0.4

Aug 17, 2023

This version

0.0.3

Jul 31, 2023

0.0.2

Jul 30, 2023

0.0.1

Jun 28, 2023

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