Skip to main content

sdrfcheck

Library and tool to validate an sdrf (Sample and Data Relationship Format) for proteomics. The file format specification can be found here (https://github.com/bigbio/proteomics-metadata-standard)

How to use it:

First you need to install the tool:

pip install sdrfchecker

Then, you can use the tool by executing the following command:

python sdrfchecker.py validate-sdrf --sdrf_file {here_the_path_to_sdrf_file}

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

sdrfcheck-0.0.4.tar.gz (7.4 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

sdrfcheck-0.0.4-py3-none-any.whl (14.0 kB view details)

Uploaded Python 3

File details

Details for the file sdrfcheck-0.0.4.tar.gz.

File metadata

  • Download URL: sdrfcheck-0.0.4.tar.gz
  • Upload date:
  • Size: 7.4 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/41.2.0 requests-toolbelt/0.9.1 tqdm/4.43.0 CPython/3.8.1

File hashes

Hashes for sdrfcheck-0.0.4.tar.gz
Algorithm Hash digest
SHA256 bfac247698bec522586009cb7303a1003b40f9b2afac9dee070f2cb2b04caef2
MD5 e2320c4d1cff457c0eecee5cf2aea3c5
BLAKE2b-256 53e5328cd96ce9a865b85ac97b59368302e3950807d751844527dbae7c35a1aa

See more details on using hashes here.

File details

Details for the file sdrfcheck-0.0.4-py3-none-any.whl.

File metadata

  • Download URL: sdrfcheck-0.0.4-py3-none-any.whl
  • Upload date:
  • Size: 14.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/41.2.0 requests-toolbelt/0.9.1 tqdm/4.43.0 CPython/3.8.1

File hashes

Hashes for sdrfcheck-0.0.4-py3-none-any.whl
Algorithm Hash digest
SHA256 89db9087d8571c83815e948044556b31de8f82465b818906c8182cc217a7bd07
MD5 57e85a4d646a20825d2b84da3c624f29
BLAKE2b-256 be6060d1327ba6ff096281744f8dc97053b7692d3b8c02f873e19c3824aba240

See more details on using hashes here.

Release history Release notifications | RSS feed

This release

0.0.4 This release

2 files

0.0.3

2 files

0.0.2

1 file

0.0.1

1 file

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page