SFSUtils 
sfsutils is a package for parsing site frequency spectra (SFS), with support for versatile stratification, ancestral allele and site-degeneracy annotation, and filtering. Beyond the one-dimensional spectrum it also derives the joint SFS across several populations and the two-site SFS of linked pairs of sites, and reads from VCF files, VCF-Zarr stores, and tskit tree sequences (ARGs).
Please see the documentation for all the details.
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Release files for sfsutils-popgen 1.1.2
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Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| sfsutils_popgen-1.1.2.tar.gz | 161.5 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| sfsutils_popgen-1.1.2-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 329.4 kB
Release files / sfsutils_popgen-1.1.2.tar.gz
| Download URL | sfsutils_popgen-1.1.2.tar.gz |
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| Size | 161.5 kB |
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Release files / sfsutils_popgen-1.1.2-py3-none-any.whl
| Download URL | sfsutils_popgen-1.1.2-py3-none-any.whl |
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| Size | 167.9 kB |
| Tags | Python 3 |
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