Python implementation of SWIFT-IR
Project description
spectralign - Spectral methods for aligning image stacks
Introduction
Spectralign is a re-implementation of the SWIFT-IR algorithm by Art Wetzel of the Pittsburgh Supercomputing Center, which was described in Wetzel et al., 2016.
This implementation presents an object-oriented interface to the algorithm and some examples of use are included.
Installation
Spectralign may be obtained by
pip install spectralign
Examples
Development
Development of spectralign is on github.
Acknowledgments
The original algorithm was written in C by Art Wetzel. The most recent version of that project is at github.com/mcellteam/swift-ir. (That repository also includes an earlier version of my Python implementation as well as a GUI that uses it.)
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