submitex 0.0.1

replacefigs

import submitex.replacefigs as rf

tex = r"""
\begin{figure} \includegraphics[width=1in]{foo/bar} \includegraphics{result.png} \end{figure}

\begin{figure} \includegraphics[width=1in]{foo/bong.jpg} \end{figure}
"""

newtex, figpaths = rf.convert_and_get_figure_paths(tex, figure_prefix='figure_')

print(newtex)
for src, trg in figpaths:
    print(src, trg)

Output:

\begin{figure} \includegraphics[width=1in]{figure_01a} % original file: foo/bar
 \includegraphics{figure_01b.png} % original file: result.png
 \end{figure}

\begin{figure} \includegraphics[width=1in]{figure_02.jpg} % original file: foo/bong.jpg
 \end{figure}

foo/bar figure_01a
result.png figure_01b.png
foo/bong.jpg figure_02.jpg

collectfloats

import submitex.collectfloats as cf

tex = r"""\begin{document}
\begin{figure} \end{figure}
Test
\begin{figure} \end{figure} \begin{ table} \end{table }
This is another paragraph
\end{document}
"""

print(cf.convert(tex))

Output:

\begin{document}

Test

This is another paragraph
\afterpage{%
\begin{figure} \end{figure}
\clearpage}

\afterpage{%
\begin{figure} \end{figure}
\clearpage}

\afterpage{%
\begin{ table} \end{table }
\clearpage}

\end{document}

replacebib

import submitex.replacebib as rb

tex = r"""
\bibliographystyle{vancouver}
%\bibliographystyle{chicago}
%\bibliography{main.bib}
\bibliography {main.bib}
"""
bib = r"""
\begin{thebibliography}
\end{thebibliography}
"""
print(rb.convert(tex,bib))

Output:

%\bibliographystyle{chicago}
%\bibliography{main.bib}

\begin{thebibliography}
\end{thebibliography}

resolveinputs

File section1.tex:

\section{Section 1}
This is Section 1.

import submitex.resolveinputs as ri

tex = r"""
\input{ section01.tex}
%\input{ section01.tex}
"""

print(ri.convert(tex))

Output:

\section{Section 1}
This is Section 1.

%\input{ section01.tex}

resolvepipes

import submitex.resolvepipes as rp

tex = r"There's \inp{|python -c 'print(int(24*60*60*365.25))'} seconds in a year."
print("source:", tex)
print("out   :", rp.convert(tex), '\n')

tex = r"There's $\input { | ls -al ~ | wc -l }$ files/directories in your user directory."
print("source:", tex)
print("out   :", rp.convert(tex))

Output:

source: There's \inp{|python -c 'print(int(24*60*60*365.25))'} seconds in a year.
out   : There's 31557600 seconds in a year.

source: There's $\input { | ls -al ~ | wc -l }$ files/directories in your user directory.
out   : There's $      62$ files/directories in your user directory.

removecomments

import submitex.removecomments as rc
sample = r"""
code % comment
code with escaped \% percent stays
path with backslashes \\% not a comment
line with no comment



next line % another comment

\includegraphics[width=0.5\textwidth]{Fig35.pdf} % original file: example.pdf
   %
%
%
"""
print(rc.clean_text(sample))

Output:

code
code with escaped \% percent stays
path with backslashes \\
line with no comment

next line

\includegraphics[width=0.5\textwidth]{Fig35.pdf}
%

resolvepipes oldmanuscript.tex > newmanuscript.tex
cat oldmanuscript.tex | resolvepipes > newmanuscript.tex

replacebib oldmanuscript > newmanuscript.tex

cat oldmanuscript.tex | replacebib -b otherbibfile.bbl > newmanuscript.tex

replacebib manuscript | replacefigs | collectfloats | resolveinputs | resolvepipes | removecomments > newmanuscript.tex

replacefigs

usage: replacefigs [-h] [-e ENC] [-d] [-F FIGPREFIX] [filename]

Rename all figure files in the `\includegraphics`-environment to generic
enumerated names and copy the respective files with the new names to top-
level.

positional arguments:
  filename              Files to convert

options:
  -h, --help            show this help message and exit
  -e ENC, --enc ENC     encoding
  -d, --dontcopyfigs    Per default, the figures that are found will be copied
                        to the current working directory, but you can turn
                        that off with this flag.
  -F FIGPREFIX, --figprefix FIGPREFIX
                        The prefix for the renamed figures (default: "Fig",
                        such that Fig01, Fig02, ...)

collectfloats

usage: collectfloats [-h] [-e ENC] [filename]

Remove all figure- and table-environments from their respective place in the
document body and put them on their own page at the end of the document, first
figures, then tables.

positional arguments:
  filename           Files to convert

options:
  -h, --help         show this help message and exit
  -e ENC, --enc ENC  encoding

replacebib

usage: replacebib [-h] [-e ENC] [-b BIB] [filename]

Put the content of the bbl-file into the section where previouly laid
`\biblipgraphystyle{...}\bibliography{filename}`

positional arguments:
  filename           Files to convert

options:
  -h, --help         show this help message and exit
  -e ENC, --enc ENC  encoding
  -b BIB, --bib BIB  We'll try to deduce a bib-file from the passed filename
                     of the TeX-source, but in case the bib-file is named
                     differently, you can provided it here

resolveinputs

usage: resolveinputs [-h] [-e ENC] [filename]

Replace `\input{filename}` with the content of `filename`

positional arguments:
  filename           Files to convert

options:
  -h, --help         show this help message and exit
  -e ENC, --enc ENC  encoding

resolvepipes

usage: resolvepipes [-h] [-e ENC] [filename]

Convert \input{|command} to the output of `command`.

positional arguments:
  filename           Files to convert

options:
  -h, --help         show this help message and exit
  -e ENC, --enc ENC  encoding

Example:

resolvepipes manuscript.tex > manuscript_with_executed_commands.tex
cat manuscript.tex | resolvepipes > manuscript_cmds.tex

removecomments

usage: removecomments [-h] [-e ENC] [filename]

Replace all comments with an empty string and squash all empty lines to one empty line

positional arguments:
  filename           Files to convert

options:
  -h, --help         show this help message and exit
  -e ENC, --enc ENC  encoding

Example:

removecomments manuscript.tex > manuscript_with_removed_comments.tex
cat manuscript.tex | removecomments > manuscript_clean.tex