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TFitPy (Transcription Factor Fitness)

TFitPy (which stands for Transcription Factor Fitness) is a python package to access the combinatorial potential of Transcription Factors in Gene Regulation of a target gene.

Installation

Use poetry add tfitpy@^0.0.6 --python ">=3.11,<3.14.1 || >3.14.1,<4.0" if facing version issues

Or using PIP: pip install tfitpy

Initial setup

This package requires a lot of biological data to compute various validation indices.

Validate Co-regulators of a target gene

Step 1 : Load datasets

Step 2 : Generate indices

Metadata

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