TFit : Assessing the combinatorial potential of Transcription Factors in Gene Regulation
Project description
TFitPy (Transcription Factor Fitness)
TFitPy (which stands for Transcription Factor Fitness) is a python package to access the combinatorial potential of Transcription Factors in Gene Regulation of a target gene.
Installation
Use poetry add tfitpy@^0.0.6 --python ">=3.11,<3.14.1 || >3.14.1,<4.0" if facing version issues
Or using PIP: pip install tfitpy
Initial setup
This package requires a lot of biological data to compute various validation indices.
Validate Co-regulators of a target gene
Step 1 : Load datasets
Step 2 : Generate indices
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