Common Code
Code that both LiveCellAnalysis and smFISH (or others) use and doesn't get major changes goes here.
Installation (Ubuntu)
pip install tllab_common
or editable:
git clone git@github.com:Lenstralab/tllab_common.git
pip install -e tllab_common/ --user
Installation of Maven and OpenJDK
Running the livecell_track_movies pipeline with segmentation using trackmate requires OpenJDK and Maven. If not installed already you will have to install them manually and make sure mvn is on the path.
2 maintainers
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