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Pythonic wrapper for the Kappa language (bio simulations)

Project description

Topkappy is a Python library built on top kappy to use the Kappa language (for simulation of biological complexation processes) in a pythonic way, using Python objects to define agents and rules, and with some methods for plotting complexes and time series.

Infos

PIP installation:

pip install topkappy

Github Page

https://github.com/Edinburgh-Genome-Foundry/topkappy

License: MIT, Copyright Edinburgh Genome Foundry

More biology software

https://raw.githubusercontent.com/Edinburgh-Genome-Foundry/Edinburgh-Genome-Foundry.github.io/master/static/imgs/logos/egf-codon-horizontal.png

Topkappy is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.

Project details


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Files for topkappy, version 0.2.2
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