A Python package for calculating tissue-specificity metrics for gene expression.
Project description
tspex
tspex is a Python package for calculating tissue-specificity metrics from gene expression data.
tspex features include:
- An easy-to-use object-oriented interface.
- Twelve different tissue-specificity metrics.
- Integration with pandas.
- Graphing functions.
- Support for Jupyter notebooks.
Installation
# Using pip
$ pip install tspex
# using conda
$ conda install -c bioconda tspex
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