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A comprehensive CLI tool for VASP pre-processing (Supercells, K-points) and post-processing (DOS, Band Structure plotting)

Project description

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Valyte

Valyte is a CLI tool for VASP workflows — pre-processing and post-processing — built for clean, publication-quality output.

Full Documentation → valyte-project.readthedocs.io


Features

Pre-processing

Command Description
valyte supercell Generate supercells from POSCAR files
valyte kpt Interactive KPOINTS generation (Monkhorst-Pack / Gamma)
valyte band kpt-gen Automatic high-symmetry k-path (Bradley-Cracknell by default)
valyte potcar Generate POTCAR from POSCAR species

Post-processing

Command Description
valyte dos Total and projected DOS with orbital resolution and gradient fills
valyte band Color-coded band structure with VBM aligned to 0 eV
valyte band --tricolor Orbital-resolved tricolor band structure
valyte ipr Inverse Participation Ratio from PROCAR

Installation

pip install valyte

To update:

pip install --upgrade valyte

Or from source:

git clone https://github.com/nikyadav002/Valyte-Project
cd Valyte-Project
pip install -e .

Gallery

DOS Plot Example Band Structure Example


Usage

Run valyte --help or valyte <command> --help at any time.

Supercell
valyte supercell nx ny nz [options]
Option Default Description
-i, --input POSCAR Input POSCAR file
-o, --output POSCAR_supercell Output filename
valyte supercell 2 2 2
valyte supercell 3 3 1 -i POSCAR_primitive -o POSCAR_3x3x1
Band Structure — KPOINTS generation

Automatically generate a line-mode KPOINTS file with high-symmetry paths.

valyte band kpt-gen [options]
Option Default Description
-i, --input POSCAR Input POSCAR file
-n, --npoints 40 Points per segment
-o, --output KPOINTS Output filename
--mode bradcrack Path convention: bradcrack, seekpath, latimer_munro, setyawan_curtarolo
valyte band kpt-gen -n 60
valyte band kpt-gen --mode seekpath

Important: A POSCAR_standard file is also written. You must use this standardized structure for the band calculation (cp POSCAR_standard POSCAR) — the k-path corresponds to this specific cell orientation.

Band Structure — Standard plot

Bands are colored purple (valence) and teal (conduction), with the VBM set to 0 eV.

valyte band [options]
Option Default Description
--vasprun . Path to vasprun.xml or directory
--kpoints auto-detected Path to KPOINTS file for labels
--ylim -4 4 Energy window
-o, --output valyte_band.png Output filename
--font Arial Font: Arial, Helvetica, Times New Roman
--save-data off Save band data to valyte_band.dat
valyte band --ylim -3 3 -o my_bands.png
valyte band --ylim -3 3 --save-data
Band Structure — Tricolor orbital-resolved plot

Each band segment is colored by blending three base colors weighted by the relative orbital/element projection at each k-point. A ternary triangle legend is drawn in the corner.

valyte band --tricolor SPEC1 SPEC2 SPEC3 [options]

Spec formats:

Format Example Selects
Orbital s, p, d, f That orbital across all atoms
Element Fe, O All orbitals for that element
Element + orbital Fe:d, O(p) Specific orbital for that element
Option Default Description
--tricolor 3 specs (required)
--tricolors #e74c3c #2ecc71 #3498db 3 colors (red, green, blue)
--tri-labels spec strings 3 labels for the triangle legend
--lw 2.0 Line width
--save-data off Save band data to valyte_band.dat

Requirement: VASP must be run with LORBIT = 11 (or ≥ 10) to write projected eigenvalues into vasprun.xml.

# s / p / d — default red, green, blue
valyte band --tricolor s p d --ylim -4 4

# Element-resolved (e.g. MoSSe)
valyte band --tricolor Mo S Se \
  --tricolors "#e74c3c" "#2ecc71" "#3498db" \
  --tri-labels Mo S Se --ylim -3 3

# Element + orbital resolved
valyte band --tricolor Fe:d O:p s --ylim -5 5 -o orbital_band.png
DOS — Density of States
valyte dos [path/to/vasprun.xml] [options]
Option Default Description
-e, --elements all Elements/orbitals to plot
--xlim -6 6 Energy range
--ylim auto DOS range
--scale 1.0 Divide DOS by this factor
--fermi off Draw dashed line at E = 0
--pdos off Show only projected DOS
--legend-cutoff 0.10 Hide legend if PDOS fraction < threshold
-o, --output valyte_dos.png Output filename
--font Arial Font family
--save-data off Save DOS data to valyte_dos.dat
valyte dos                            # All orbitals, all elements
valyte dos -e Fe O                    # Total PDOS for Fe and O
valyte dos -e "Fe(d)" "O(p)"          # Specific orbitals
valyte dos -e Fe "Fe(d)"              # Fe total + Fe d-orbital
valyte dos ./run --xlim -5 5 --fermi -o my_dos.png
valyte dos -e Fe O --save-data        # Save data to valyte_dos.dat
K-Points — Interactive SCF grid
valyte kpt

Prompts for K-mesh scheme (Monkhorst-Pack or Gamma) and K-spacing in 2π/Å, then calculates the optimal grid from your POSCAR.

POTCAR
valyte potcar [options]
Option Default Description
-i, --input POSCAR Input POSCAR file
-o, --output POTCAR Output filename
--functional PBE PBE, PBE_52, PBE_54, LDA, etc.
valyte potcar
valyte potcar --functional PBE_54
valyte potcar -i POSCAR_relaxed -o POTCAR_new

Pymatgen configuration required: Set PMG_VASP_PSP_DIR in ~/.pmgrc.yaml. See the Pymatgen docs.

IPR — Inverse Participation Ratio

Compute the Inverse Participation Ratio from PROCAR to quantify wavefunction localization.

valyte ipr

Interactive — reads PROCAR, shows system info, prompts for band indices, saves results to ipr_procar.dat.

Output columns: Band | Energy (eV) | IPR | N_eff (= 1/IPR)

A state localized on a single atom has IPR ≈ 1 and N_eff ≈ 1. Delocalized band states have small IPR and large N_eff. Use IPR to identify defect states in supercell calculations.


License

This project is licensed under the MIT License.

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