Visible Residues
This is an extension module implementing one performance-critical function used to create a machine learning dataset of 3D images of macromolecules with labeled amino acid identities. Specifically, the function accepts a dataframe of atoms in the image, then samples a fixed number of residues whose sidechains are likely to be mostly within the image. To avoid biasing the samples based on the specific sidechains involved (e.g. glycine has a smaller sidechain than arginine, so it might be sampled more often if the actual sidechain was considered), this "within the image" determination is based entirely on backbone coordinates.
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Release files for visible-residues 0.3.0
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Source distribution (sdist)
| File | Size | Uploaded | |
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| visible_residues-0.3.0.tar.gz | 1.1 MB | Details |
Built distributions (wheels)
Total release size: 43.7 MB
Release files / visible_residues-0.3.0.tar.gz
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