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This release is a pre-release and may not be stable for production use.

xarray-behave

Install a working conda installation (see here).

conda env create -n xb -y -f https://raw.githubusercontent.com/janclemenslab/xarray-behave/refs/heads/master/env/xb.yml

See demo.ipynb for usage examples.

GUI configuration

The GUI saves reusable state to ~/.das.yaml when it closes cleanly. This includes the window and panel layout, display and annotation options, audio and threshold settings, event-type presets, and the last reusable load-dialog choices. Source-specific values such as file paths, HDF5 dataset names, inferred sample rates, and pixel calibration are deliberately not saved.

Configuration is applied in this order, with later values taking precedence:

  1. Built-in defaults.
  2. ~/.das.yaml.
  3. .das.yaml in a directory source, or beside a file or .zarr source.
  4. A file supplied with --config.
  5. Explicit command-line options and edits made in the load dialog.

For example:

python -m xarray_behave.gui.app recording.wav --config lab-profile.yaml

Use File > Save Configuration As... to create a local or shared profile. Configuration files are versioned YAML mappings. A minimal profile is:

version: 1
window:
  panels:
    sidebar: true
    timeline: true
    event_table: true
viewer:
  spectrogram:
    colormap: magma
    compression: 3
  audio:
    waveform_all: true
    playback_all: false
event_types:
  - name: pulse
    fixed_duration: true
    duration_seconds: 0.01
    duration_editable: false
    color_hex: "#ffd166"
    visible: true
    editable: true

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