xiFDR: A tool for FDR analysis in cross-linking mass spectrometry
Verified details
These details have been verified by PyPIProject links
GitHub Statistics
Maintainers
Project description
xiFDR is a tool for crosslink mass spectrometry (CLMS) false discovery rate (FDR) estimation and crosslink spectrum match (CSM) aggregation. Usual applications are the extraction of residue links or protein-protein interactions (PPIs) above a desired significance threshold. Further, xiFDR supports boosting of FDR levels to obtain the largest possible number of residue-links or PPIs by finding the optimal FDR thresholds.
Documentation
Documentation can be found under https://xifdr-py.readthedocs.io/
Project details
Verified details
These details have been verified by PyPIProject links
GitHub Statistics
Maintainers
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file xifdr-3.0.0a13.tar.gz.
File metadata
- Download URL: xifdr-3.0.0a13.tar.gz
- Upload date:
- Size: 71.2 MB
- Tags: Source
- Uploaded using Trusted Publishing? Yes
- Uploaded via: twine/6.1.0 CPython/3.12.9
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
7946fcf2c9ca1d87aec84951c279bf04728729dc8667ab79d67862cee0a580bf
|
|
| MD5 |
7c7a718e6793d7d0a5830de09e726acc
|
|
| BLAKE2b-256 |
47daf09951ff756841fbc9ddbd360f9c6996cebc2a90085e8569596629ecd05e
|
Provenance
The following attestation bundles were made for xifdr-3.0.0a13.tar.gz:
Publisher:
python-publish.yml on Rappsilber-Laboratory/xiFDR-py
-
Statement:
-
Statement type:
https://in-toto.io/Statement/v1 -
Predicate type:
https://docs.pypi.org/attestations/publish/v1 -
Subject name:
xifdr-3.0.0a13.tar.gz -
Subject digest:
7946fcf2c9ca1d87aec84951c279bf04728729dc8667ab79d67862cee0a580bf - Sigstore transparency entry: 323759622
- Sigstore integration time:
-
Permalink:
Rappsilber-Laboratory/xiFDR-py@85bccd3d5c0ca972514b38173e352a172ee1d1ee -
Branch / Tag:
refs/tags/v3.0.0a13 - Owner: https://github.com/Rappsilber-Laboratory
-
Access:
public
-
Token Issuer:
https://token.actions.githubusercontent.com -
Runner Environment:
github-hosted -
Publication workflow:
python-publish.yml@85bccd3d5c0ca972514b38173e352a172ee1d1ee -
Trigger Event:
release
-
Statement type:
File details
Details for the file xifdr-3.0.0a13-py3-none-any.whl.
File metadata
- Download URL: xifdr-3.0.0a13-py3-none-any.whl
- Upload date:
- Size: 15.8 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? Yes
- Uploaded via: twine/6.1.0 CPython/3.12.9
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
fa6c669a0a34acf83876392673f7853ea4854f686c869ab6fffeeaeaba9af998
|
|
| MD5 |
bd39d3a5c161da9861519dfdc7acb010
|
|
| BLAKE2b-256 |
9bd11ac6bfceacbebbd8d199864caef92b4c48bbe5300541fa85e8bf5490598f
|
Provenance
The following attestation bundles were made for xifdr-3.0.0a13-py3-none-any.whl:
Publisher:
python-publish.yml on Rappsilber-Laboratory/xiFDR-py
-
Statement:
-
Statement type:
https://in-toto.io/Statement/v1 -
Predicate type:
https://docs.pypi.org/attestations/publish/v1 -
Subject name:
xifdr-3.0.0a13-py3-none-any.whl -
Subject digest:
fa6c669a0a34acf83876392673f7853ea4854f686c869ab6fffeeaeaba9af998 - Sigstore transparency entry: 323759646
- Sigstore integration time:
-
Permalink:
Rappsilber-Laboratory/xiFDR-py@85bccd3d5c0ca972514b38173e352a172ee1d1ee -
Branch / Tag:
refs/tags/v3.0.0a13 - Owner: https://github.com/Rappsilber-Laboratory
-
Access:
public
-
Token Issuer:
https://token.actions.githubusercontent.com -
Runner Environment:
github-hosted -
Publication workflow:
python-publish.yml@85bccd3d5c0ca972514b38173e352a172ee1d1ee -
Trigger Event:
release
-
Statement type:
