Zerodose
Project description
Zerodose
A tool to assist in personalized abnormality investigation in combined FDG-PET/MRI imaging. Created by the department of Clinically Applied Artificial Intelligence at Copenhagen University Hospital
Installation
Note that a python3 installation is required for Zerodose to work. You can install Zerodose via pip from PyPI:
$ pip install zerodose
Usage
Synthesize baseline PET
$ zerodose syn -i mr.nii.gz -m brain_mask.nii.gz -o sb_pet.nii.gz
Create abnormality map
$ zerodose abn -p pet.nii.gz -s sb_pet.nii.gz -m brain_mask.nii.gz -o abn.nii.gz
Please see the Command-line Reference for details.
Hardware requirements
- TODO
Issues and contributing
Contributions are very welcome. If you encounter any problems, please file an issue along with a description.
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file zerodose-0.0.6.tar.gz.
File metadata
- Download URL: zerodose-0.0.6.tar.gz
- Upload date:
- Size: 17.4 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.11.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
a5c786a62d2c6d886426c398244870f1ebc9852432d8ea5557a1a34573137d9f
|
|
| MD5 |
fab91b54599583175e4619b4960e6e12
|
|
| BLAKE2b-256 |
a84d7f3528c1ddb3d6889af2d12b221dedf17e2b498806818acc964a321f64c0
|
File details
Details for the file zerodose-0.0.6-py3-none-any.whl.
File metadata
- Download URL: zerodose-0.0.6-py3-none-any.whl
- Upload date:
- Size: 22.3 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.11.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
a1dfa1b9d7c610b5cc79afd0050cab8e0257be246d1e2970ca8b9bd3ee050878
|
|
| MD5 |
17b599f2a73bc17c1ca95cd069de3861
|
|
| BLAKE2b-256 |
0a78c676215d0398363ed2e648330c5c7b0fa555a69bebf5664587b62552858e
|
