Zymp is a Python library to design “restriction site arrays”, which are compact sequences with many restriction sites.
For instance here is a 159-nucleotide sequence made with Zymp, with 49 enzyme recognition sites (out of 52 provided). That’s a frequency of around 3 nucleotides per site:
Infos
PIP installation:
pip install zympGithub page: https://github.com/Edinburgh-Genome-Foundry/zymp
License: MIT
Copyright 2018 Edinburgh Genome Foundry, University of Edinburgh
More biology software
Zymp is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.
1 maintainer
Release files for zymp 0.1.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| zymp-0.1.4.tar.gz | 10.0 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| zymp-0.1.4-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 19.7 kB
Release files / zymp-0.1.4.tar.gz
| Download URL | zymp-0.1.4.tar.gz |
|---|---|
| Size | 10.0 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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Transparency logRelease files / zymp-0.1.4-py3-none-any.whl
| Download URL | zymp-0.1.4-py3-none-any.whl |
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| Size | 9.7 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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| Uploaded via |
twine/6.1.0 CPython/3.12.9
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