Skip to main content
Join the official 2019 Python Developers SurveyStart the survey!

Design compact sequences with many enzyme restriction sites.

Project description

Zymp is a Python library to design “restriction site arrays”, which are compact sequences with many restriction sites.

For instance here is a 159-nucleotide sequence made with Zymp, with 49 enzyme recognition sites (out of 52 provided). That’s a frequency of around 3 nucleotides per site:

https://raw.githubusercontent.com/Edinburgh-Genome-Foundry/zymp/master/docs/_static/images/example_array.png

Infos

PIP installation:

pip install zymp

Github Page

https://github.com/Edinburgh-Genome-Foundry/zymp

License: MIT, Copyright Edinburgh Genome Foundry

More biology software

https://raw.githubusercontent.com/Edinburgh-Genome-Foundry/Edinburgh-Genome-Foundry.github.io/master/static/imgs/logos/egf-codon-horizontal.png

Zymp is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.

Project details


Release history Release notifications

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for zymp, version 0.1.0
Filename, size File type Python version Upload date Hashes
Filename, size zymp-0.1.0.tar.gz (10.6 kB) File type Source Python version None Upload date Hashes View hashes

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN SignalFx SignalFx Supporter DigiCert DigiCert EV certificate StatusPage StatusPage Status page