IgDiscover
IgDiscover analyzes antibody repertoires and discovers new V genes from high-throughput sequencing reads. Heavy chains, kappa and lambda light chains are supported (to discover VH, VK and VL genes).
IgDiscover is the result of a collaboration between the Gunilla Karlsson Hedestam group at the Department of Microbiology, Tumor and Cell Biology at Karolinska Institutet, Sweden and the Bioinformatics Long-Term Support facility at Science for Life Laboratory (SciLifeLab), Sweden.
If you use IgDiscover, please cite:
Corcoran, Martin M. and Phad, Ganesh E. and Bernat, Néstor Vázquez and Stahl-Hennig, Christiane and Sumida, Noriyuki and Persson, Mats A.A. and Martin, Marcel and Karlsson Hedestam, Gunilla B.Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity.Nature Communications 7:13642 (2016)
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Release files for igdiscover 0.15.1
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| igdiscover-0.15.1.tar.gz | 253.3 kB | Without provenance | Details for igdiscover-0.15.1.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| igdiscover-0.15.1-py3-none-any.whl | Python 3 | none | any | Details for igdiscover-0.15.1-py3-none-any.whl |
Total release size: 363.1 kB
Release files / igdiscover-0.15.1.tar.gz
| Download URL | igdiscover-0.15.1.tar.gz |
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| Size | 253.3 kB |
| Tags | Source |
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Release files / igdiscover-0.15.1-py3-none-any.whl
| Download URL | igdiscover-0.15.1-py3-none-any.whl |
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| Size | 109.8 kB |
| Tags | Python 3 |
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