Flynn OConnell

imgui_data_loader

Last released Jul 14, 2026

A themed, configurable imgui file/folder open dialog widget built on imgui-bundle.

lbm_suite2p_python

Last released Jun 30, 2026

Calcium Imaging Pipeline built with Suite2p, Cellpose and Rastermap

mbo_utilities

Last released Jun 30, 2026

Various utilities for the Miller Brain Observatory

isoview

Last released Jun 30, 2026

Multi-view light sheet microscopy image processing pipeline

lbm_caiman_python

Last released Jun 24, 2026

Light Beads Microscopy Pipeline using CaImAn

dotfiles-cli

Last released Jan 20, 2026

CLI tool to sync and manage dotfiles across machines

mbo-fastplotlib

Last released Dec 17, 2025

Next-gen fast plotting library running on WGPU using the Pygfx rendering engine

pyklb

Last released Oct 31, 2025

Python wrapper for the Keller Lab Block (KLB) file format - high-performance storage for 5D microscopy images

mbo-fpl

Last released Oct 24, 2025

Next-gen fast plotting library running on WGPU using the Pygfx rendering engine

lbm-mc

Last released Jan 19, 2025

High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn

metricspace

Last released Jul 11, 2023

A python translation of code originally theorized in: Metric-space analysis of spike trains: theory, algorithms, and application Jonathan D. Victor and Keith Purpura Network 8, 127-164 (1997)

rs-distances

Last released Jun 9, 2023

A Python module implemented in Rust for efficient calculations

canalysis

Last released Nov 10, 2022

Calcium Imaging trace analysis with statistics and machine learning.

web-graph-testing

Last released Oct 3, 2022

Testing some web/graphical applications and interfaces.

mbo_suite3d Archived

Last released Apr 14, 2026

Fast, volumetric cell detection. In development.