18 projects
alphaquant
An open-source Python package of the AlphaPept ecosystem
scportrait
Computational framework to generate single cell datasets from raw microscopy images.
alphabase
An infrastructure Python package of the AlphaX ecosystem
alphadia
A novel proteomics search engine for DIA data based on end-to-end transfer learning.
alphadia-search-rs
A next-generation search backend for AlphaDIA.
alpharaw
An open-source Python package to unify raw MS data access and storage.
quantselect
An open-source Python package of the AlphaPept ecosystem
alphapepttools
Search- and quantification-engine agnostic biological interpretation of proteomics data
peptdeep
The AlphaX deep learning framework for Proteomics
alphastats
An open-source Python package for automated and scalable statistical analysis of mass spectrometry-based proteomics
py-lmd
Read, Modify and Create new shape files for the Leica LMD6 & LMD7
pydiaid
An open-source Python package of the AlphaPept ecosystem
alphatims
None
alphamap
None
structuremap
An open-source Python package of the AlphaPept ecosystem
alphapept
A modular, python-based framework for mass spectrometry.
alphaviz
A interactive Dashboard to explore mass spectrometry data.
msexpert
An open-source Python package of the AlphaPept ecosystem
