18 projects
alpharaw
An open-source Python package to unify raw MS data access and storage.
py-lmd
Read, Modify and Create new shape files for the Leica LMD6 & LMD7
alphatims
None
alphadia
A novel proteomics search engine for DIA data based on end-to-end transfer learning.
peptdeep
The AlphaX deep learning framework for Proteomics
alphapepttools
Search- and quantification-engine agnostic biological interpretation of proteomics data
alphabase
An infrastructure Python package of the AlphaX ecosystem
scportrait
Computational framework to generate single cell datasets from raw microscopy images.
alphaquant
An open-source Python package of the AlphaPept ecosystem
alphadia-search-rs
A next-generation search backend for AlphaDIA.
quantselect
An open-source Python package of the AlphaPept ecosystem
alphastats
An open-source Python package for automated and scalable statistical analysis of mass spectrometry-based proteomics
pydiaid
An open-source Python package of the AlphaPept ecosystem
alphamap
None
structuremap
An open-source Python package of the AlphaPept ecosystem
alphapept
A modular, python-based framework for mass spectrometry.
alphaviz
A interactive Dashboard to explore mass spectrometry data.
msexpert
An open-source Python package of the AlphaPept ecosystem
