11 projects
alphapept
A modular, python-based framework for mass spectrometry.
peptdeep
The AlphaX deep learning framework for Proteomics
alpharaw
An open-source Python package to unify raw MS data access and storage.
alphabase
An infrastructure Python package of the AlphaX ecosystem
pydiaid
An open-source Python package of the AlphaPept ecosystem
alphastats
An open-source Python package for automated and scalable statistical analysis of mass spectrometry-based proteomics
alphatims
A Python package to index Bruker TimsTOF raw data for fast and easy accession and visualization
structuremap
An open-source Python package of the AlphaPept ecosystem
alphaviz
A interactive Dashboard to explore mass spectrometry data.
alphamap
Peptide level analysis of bottom-up proteomics data
msexpert
An open-source Python package of the AlphaPept ecosystem