120 projects
segmentation-skeleton-metrics
Python package for evaluating neuron segmentations in terms of the number of splits and merges
aind-metadata-upgrader
Generated from aind-library-template
aind-pophys-converter
Generated from aind-library-template
aind-behavior-vr-foraging-curricula
A library of curricula for the VrForaging task.
aind-behavior-vr-foraging
A library that defines AIND data schema for the Aind Behavior VR Foraging experiment.
aind-data-schema-models
Generated from aind-library-template
aind-clabe
A library for a minimal framework that can be used to build experimental interfaces.
aind-metadata-service-async-client
aind-metadata-service
aind-metadata-service-client
aind-metadata-service
allen-powerplatform-client
Default title
aind-log-utils
Add logging to Code Ocean capsules
aind-data-transfer-lite
Generated from aind-library-template
aind-dataverse-service-client
aind-dataverse-service
aind-dataverse-service-async-client
aind-dataverse-service
aind-airflow-jobs
Global classes for AIND Airflow service
aind-active-directory-service-async-client
aind-active-directory-service
aind-active-directory-service-client
aind-active-directory-service
aind-session-json-service-async-client
aind-session-json-service
aind-session-json-service-client
aind-session-json-service
aind-mgi-service-client
aind-mgi-service
aind-mgi-service-async-client
aind-mgi-service
aind-labtracks-service-client
aind-labtracks-service
aind-labtracks-service-async-client
aind-labtracks-service
aind-smartsheet-service-client
aind-smartsheet-service
aind-smartsheet-service-async-client
aind-smartsheet-service
aind-tars-service-client
aind-tars-service
aind-tars-service-async-client
aind-tars-service
aind-slims-service-client
aind-slims-service
aind-slims-service-async-client
aind-slims-service
aind-data-transfer-service
Service that handles requests to upload data to the cloud
zombie-squirrel
Generated from aind-library-template
contraqctor
A library for managing data contracts and quality control in behavioral datasets.
aind-data-schema
A library that defines AIND data schema and validates JSON files.
Rhapso
A python package for aligning and stitching light sheet fluorescence microscopy images
aind-metadata-manager
Generated from aind-library-template
aind-nwb-utils
Generated from aind-library-template
aind_mri_utils
MRI utilities library for aind teams.
lc-reconstruction-analysis
Generated from aind-library-template
aind-ephys-ibl-gui-conversion
Convert ephys data for use in IBL GUI
aind-zarr-utils
Utilities for working with ZARR data and AIND metadata
aind-behavior-just_frames
A library for benchmarking online video acquisition/encoding pipelines
aind-ibl-ephys-alignment-preprocessing
Library to prepare histology and ephys for the IBL ephys alignment GUI
aind-behavior-services
A library for defining and maintaining behavior tasks.
aind-dynamic-foraging-data-utils
Functions to help with postprocessing dynamic foraging data.
aaopto-aotf
Python driver for AA OptoElectronics AOTF device.
aind-data-access-api
API to interact with a few AIND databases
aind-metadata-mcp
MCP server for AIND metadata
aind-dynamic-foraging-basic-analysis
Generated from aind-library-template
aind-disrnn-utils
Generated from aind-library-template
aind-hierarchical-bootstrap
Generated from aind-library-template
aind-behavior-curriculum
Generated from aind-library-template
aind-dynamic-foraging-multisession-analysis
Generated from aind-library-template
aind-slims-api
Generated from aind-library-template
aind-behavior-utils
Generated from aind-library-template
aind-dispim-processing
Library for Dispim Code Ocean Pipeline
test-behavior-curriculum
Generated from aind-behavior-curriculum-template
aind-data-mcp
Generated from aind-library-template
aind-data-migration-utils
Generated from aind-library-template
aind-metadata-validator
Generated from aind-library-template
aind-exaspim-pipeline-utils
AIND exaSPIM pipeline utilities.
aind-ophys-utils
Generated from aind-library-template
aind-dft-ephys-analysis
shared library for dynamic foraging task (DFT) - neuropixels analysis
aind-flake8-extensions
Generated from aind-library-template
aind-metadata-extractor
Generated from aind-library-template
analysis-pipeline-utils
Generated from aind-library-template
aind-ephys-utils
Helpful methods for exploring in vivo electrophysiology data
nmcp-precomputed
Neuron Morphology Community Portal Precomputed Toolbox
aind-hcr-data-loader
Generated from aind-library-template
allen-asset-creation-library
Code for capsule to run after a pipeline is finished.
aind-metadata-mapper
Package to manage mapping of source data into aind-data-schema metadata files.
aind-behavior-video-transformation
Handles behavior modality folder
aind-settings-utils
Utility package to add custom pydantic settings sources
aind-watchdog-service
Generated from aind-library-template
aind-metadata-utils
Generated from aind-library-template
parallax-app
GUI software for photogrammetry-assisted probe targeting in electrophysiology
aind-behavior-curriculum-template
Generated from aind-behavior-curriculum-template
aind-sharepoint-service-client
aind-sharepoint-service
aind-sharepoint-service-async-client
aind-sharepoint-service
aind-codeocean-api
CodeOcean API manager in Python
aind-alert-utils
Generated from aind-library-template
aind-data-transfer-models
Generated from aind-library-template
aind-data-transformation
Generic Etl Job template that can be imported
aind-codeocean-pipeline-monitor
Package to define and run a Code Ocean Pipeline Monitor Job
aind-smartsheet-api
Helps to convert Smartsheet json into Pydantic models
aind-codeocean-utils
Generated from aind-library-template
aind-video-utils
Tools to work with videos using ffmpeg
aind-dynamic-foraging-models
Generated from aind-library-template
LCNE-patchseq-analysis
Generated from aind-library-template
aind-analysis-arch-result-access
Generated from aind-library-template
aind-disrnn-result-access
Generated from aind-library-template
aind-physiology-fip
A repository for Fiber Photometry data acquisition
aind-behavior-gym
Generated from aind-library-template
aind-registration-utils
Tools for registration of individual brains to a template brain
aind-anatomical-utils
Tools to work with anatomically-aware files
aind-mri-targeting
Tools to plan and execute MRI-guided targeting experiments
aind-ants-transform-sidecar
Metadata for ANTs transform objects
aind-s3-cache
Small library providing a transparent local cache for S3 objects.
aind-qcportal-schema
Generated from aind-library-template
aind-chat-query-builder
Generated from aind-library-template
aind-metadata-service
REST service to retrive metadata from databases.
aind-spurious-correlation
Generated from aind-library-template
aind-behavior-core-analysis
A library with core primitives for analysis shared across all `Aind.Behavior` tasks
wavpack-numcodecs
Numcodecs implementation of WavPack audio codec.
aind-behavior-experiment-launcher
A library for a minimal framework that can be used to build experimental interfaces.
aind-slurm-rest-v2
Slurm REST API
aind-slurm-rest
Slurm REST API
metadata-chatbot
Generated from aind-library-template
aind-metadata-cli
Generated from aind-library-template
aind-dynamic-foraging-population-analysis
Utils for dynamic foraging population analysis
tigerasi
a lightweight python driver for ASI brand Tiger Controllers
aind-msma-utils
Generated from aind-library-template
claude-metadata-chatbot
Generated from aind-library-template
aind-data-transfer
Services for compression and transfer of aind-data to the cloud
changelog-test
Generated from aind-library-template
aind-hpc-client
Slurm Rest API
aind-ophys-pipeline-utils
Generated from aind-library-template
aind-segmentation-evaluation
Python package for evaluating neuron segmentations in terms of the number of splits and merges
aind-smartspim-operator-utils
Generated from aind-library-template
delta2D-numcodecs
Numcodecs implementation of delta filter in 2D.
flac-numcodecs
Numcodecs implementation of FLAC audio codec.
