11 projects
tskit
The tree sequence toolkit.
bio2zarr
Convert bioinformatics data to Zarr
tsdate
Infer node ages from a tree sequence topology.
tsbrowse
Webapp to view and visualise the information structure in tskit ARGs
tsinfer
Infer tree sequences from genetic variation data.
msprime
Simulate genealogical trees and genomic sequence data using population genetic models
tszip
Compression utilities for tree sequences
tstrait
Quantitative trait simulation of tree sequence data
kastore
A write-once-read-many store for simple numerical data
vcztools
Implementation of bcftools for VCF Zarr
tskit-book-theme
A book theme for tskit projects
