Quantitative trait simulation of tree sequence data
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tstrait
tstrait is a quantitative trait simulator of tskit tree sequences.
- Documentation: https://tskit.dev/tstrait/docs/
- Source code: https://github.com/tskit-dev/tstrait
- Tree sequence documentation: https://tskit.dev/learn/
It provides:
- Simulation of quantitative traits
- Simulation of genetic effect sizes from various distributions
- Simulation of pleiotropic phenotypes
- Simulation of environmental noise
- Computation of individual genetic values given the effect sizes of causal mutations
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