9 projects
msprime
A fast and accurate coalescent simulator.
tskit
The tree sequence toolkit.
tsinfer
Infer tree sequences from genetic variation data.
kastore
A write-once-read-many store for simple numerical data
htsget
Python API and command line interface for the GA4GH htsget API.
wormtable
Write-once read-many data sets using Berkeley DB.
kingman
An example Python package to simulate Kingman's coalescent
discsim
Efficient coalescent simulation in continuous space
ercs
Coalescent simulations in continuous space
