14 projects
stranger
Annotate VCF files with str variants
cg
Clinical Genomics command center
housekeeper
Housekeeper takes care of files
shipping
Cli utility for deploying packages
scout-browser
Clinical DNA variant visualizer and browser.
trailblazer
Trailblazer is a tool to manage and track state of analyses
genotype
genotype provides an automated pipipeline for comparinggenotypes from different assays.
crunchy
Compress fastq with spring
chanjo
Coverage analysis tool for clinical sequencing
loqusdb
Store observations of vcf variants in a mongodb
mongo-adapter
A python interface to handle connection to a mongod instance
genmod
Annotate genetic inheritance models in variant files
chanjo-report
Automatically render coverage reports from Chanjo ouput
variant_integrity
Tool to check mendelian errors and estimate if father is father
