21 projects
scikit-image
Image processing in Python
napari-plugin-manager
Install plugins for napari, in napari.
npe2
napari plugin engine v2
magicgui
build GUIs from python types
ont
Collection of random functions that @jni finds useful
mysquishy
Recompress zarr chunks in-place
skan
Skeleton analysis in Python
napari
n-dimensional array viewer in Python
affinder
Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
nd2-dask
Plugin to load nd2 data into napari
platelet-unet-watershed
Segment platelets with pretrained unet and affinity watershed
napari-plugin-engine
napari plugin engine, fork of pluggy
zarpaint
Paint segmentations directly to on-disk/remote zarr arrays
viridis
Tree data structures and algorithms
llc-tools
Prettier LowLevelCallables
mpl-volume-viewer
matplotlib orthoslice volume viewer in Python
h5cat
Quick preview of hdf5 files
llc
Prettier LowLevelCallables
skimage
Dummy package that points to scikit-image
microscopium
Clustering of High Content Screen Images
cellom2tif
Convert Cellomics images to TIFF.