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Moritz E. Beber

Username    midnighter
Date joined   Joined

18 projects

depinfo

Last released

List any package's direct dependencies and their versions.

equilibrator-api

Last released

Calculation of standard thermodynamic potentials of biochemical reactions.

equilibrator-cheminfo

Last released

Light adapter classes around Open Babel, RDKit, and ChemAxon for the functionality needed in eQulibrator.

conifer-analysis

Last released

Post-process conifer output for downstream statistical analysis.

equilibrator-assets

Last released

Generate cache assets from MetaNetX content.

equilibrator-cache

Last released

Cache application for compounds, reactions, and enzymes

cobra-component-models

Last released

SQLAlchemy ORM and pydantic data models for SQL storage and JSON serialization of COBRA components such as reactions, compounds, and compartments.

component-contribution

Last released

Standard reaction Gibbs energy estimation for biochemical reactions.

metanetx-assets

Last released

Transform MetaNetX components information and load them into SQL storage.

metanetx-sdk

Last released

Parse and clean up information from MetaNetX (https://metanetx.org).

memote

Last released

the genome-scale metabolic model test suite

structurizr-python

Last released

A Python client package for the Structurizr cloud service and on-premises installation.

dfba

Last released

Object-oriented software for dynamic flux-balance simulations.

tag-spy

Last released

Identify the latest DD-DeCaF tag on a particular Docker image.

metanetx-post

Last released

Enrich the information coming from MetaNetX from additional sources.

searchstringparser

Last released

Parse a more general search syntax to conform with a particular SQL dialect.

sanger-sequencing

Last released

Semi-automated Sanger sequence analysis for transformation verification.

jinja2-ospath

Last released

A Jinja2 extension that introduces the template filters basename and dirname.

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