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Username    moonso
Date joined   Joined

25 projects

cg

Last released

Clinical Genomics command center

loqusdb

Last released

Store observations of vcf variants in a mongodb

scout-browser

Last released

Clinical DNA variant visualizer and browser.

mongo-adapter

Last released

A python interface to handle connection to a mongod instance

cg-fluffy

Last released

NIPT analysis pipeline

chanjo

Last released

Coverage analysis tool for clinical sequencing

stranger

Last released

Annotate VCF files with str variants

genmod

Last released

Annotate genetic inheritance models in variant files

housekeeper

Last released

Housekeeper takes care of files

crunchy

Last released

Compress fastq with spring

seaviz

Last released

Play around with seaborn plots from a cli

cgstats

Last released

Models and access to cgstats

ped_parser

Last released

A ped file parser.

query_phenomizer

Last released

Tool for query and parsing the phenomizer tool

vcf_parser

Last released

Parsing vcf files

phizz-genes

Last released

Small django app to model genes

variant_integrity

Last released

Tool to check mendelian errors and estimate if father is father

puzzle

Last released

Web UI for searching genome variations

vcftoolbox

Last released

Tools for manipulating and parsing vcf files

interval_tree

Last released

Python implemetation of the interval tree

phizz

Last released

Tool to query hpo database and some other sources

extract_vcf

Last released

Tool to extract information from vcf file.

filter_variants

Last released

Filter variants based on frequencies

score_mip_variants

Last released

Annotate vcf variants with a rank score

mip_family_analysis

Last released

A new tool for doing inheritance analysis and scoring in the mip pipeline.

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