Skip to main content
Help the Python Software Foundation raise $60,000 USD by December 31st!  Building the PSF Q4 Fundraiser
Avatar for moonso from gravatar.com
Username    moonso
Date joined   Joined on

24 projects

scout-browser

Last released on

Clinical DNA variant visualizer and browser.

cg

Last released on

Clinical Genomics command center

housekeeper

Last released on

Housekeeper takes care of files

stranger

Last released on

Annotate VCF files with str variants

crunchy

Last released on

Compress fastq with spring

chanjo

Last released on

Coverage analysis tool for clinical sequencing

loqusdb

Last released on

Store observations of vcf variants in a mongodb

mongo-adapter

Last released on

A python interface to handle connection to a mongod instance

seaviz

Last released on

Play around with seaborn plots from a cli

genmod

Last released on

Annotate genetic inheritance models in variant files

cgstats

Last released on

Models and access to cgstats

ped_parser

Last released on

A ped file parser.

query_phenomizer

Last released on

Tool for query and parsing the phenomizer tool

vcf_parser

Last released on

Parsing vcf files

phizz-genes

Last released on

Small django app to model genes

variant_integrity

Last released on

Tool to check mendelian errors and estimate if father is father

puzzle

Last released on

Web UI for searching genome variations

vcftoolbox

Last released on

Tools for manipulating and parsing vcf files

interval_tree

Last released on

Python implemetation of the interval tree

phizz

Last released on

Tool to query hpo database and some other sources

extract_vcf

Last released on

Tool to extract information from vcf file.

filter_variants

Last released on

Filter variants based on frequencies

score_mip_variants

Last released on

Annotate vcf variants with a rank score

mip_family_analysis

Last released on

A new tool for doing inheritance analysis and scoring in the mip pipeline.

Supported by

Pingdom Pingdom Monitoring Google Google Object Storage and Download Analytics Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page