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108 projects

oras

Last released

OCI Registry as Storage Python SDK

singularity-compose

Last released

simple orchestration for singularity containers

rainbow-scheduler

Last released

Python gRPC functions for the Rainbow Scheduler

jobspec

Last released

Jobspec specification and translation layer for cluster work

snakedeploy

Last released

Deploy a snakemake pipeline from GitHub

flux-python

Last released

Python bindings for the flux resource manager API

kubescaler

Last released

Helper classes for scaling Kubernetes clusters

fluxterm

Last released

Terminal application to interact with Flux jobs, cheat sheets, code, and good fortune

singularity-hpc

Last released

Local registry intended for HPC using containers and system modules.

fluxoperator

Last released

Python SDK for the Flux Operator

compspec-flux

Last released

Generate resource graphs using Flux

compspec

Last released

Compatibility specifications and models

compspec-ior

Last released

Compatibility specification and extractor plugin for IOR (I/O)

urlchecker

Last released

tool to collect and validate urls over static files (code and documentation)

flux-restful-client

Last released

Python functions and command line equivalent for interacting with Flux RESTful API.

scif

Last released

a filesystem organization for scientific software and metadata

django-river-ml

Last released

Online machine learning with river and Django.

spython

Last released

Command line python tool for working with singularity.

cloud-select-tool

Last released

Tool for calculating costs and needs between cloud and HPC.

rse

Last released

tools for assessment and categorization of research software

metricsoperator

Last released

Python helpers for the Metrics Operator

deid

Last released

best effort deidentify dicom with python and pydicom

flux-burst-local

Last released

A bursting plugin for Flux and Compute Engine on Google Cloud

flux-burst

Last released

Flux module that enables burstable plugins.

flux-burst-compute-engine

Last released

A bursting plugin for Flux and Compute Engine on Google Cloud

flux-burst-gke

Last released

A bursting plugin for Flux and GKE

flux-burst-eks

Last released

A bursting plugin for Flux and EKS

sregistry

Last released

Command line tool for working with container storage

tributors

Last released

give tribute to your repository contributors.

flux-metrics-api

Last released

Custom metrics exporter for Flux in Kubernetes

prometheus-flux

Last released

Export flux instance metrics to Prometheus

pipelib

Last released

A command line client and functions for collation.

flux-cloud

Last released

deploy workflows to the flux operator in the cloud! 📦️

playground-tutorials

Last released

the fun cloud wrapper 🍬️ to deploy tutorial containers! 📦️

license-updater

Last released

Update license years

pokemon

Last released

ascii database of pokemon... in Python!

pakages

Last released

GitHub packages package manager.

django-oci

Last released

Open Containers distribution API for Django

contributor-ci

Last released

automated tools to assess contributions.

citelang

Last released

Credit parser and markdown language for scientific software.

deid-data

Last released

data to support deid, best effort deidentify dicom with python and pydicom

action-updater

Last released

Update deprecated command, versions, and other for GitHub actions

tunel

Last released

commander and viewer to tunnel commands for HPC

expfactory

Last released

software to generate a reproducible container battery of experiments.

spliced

Last released

Emulate or predict splicing outcomes.

elfcall

Last released

generate callgraph data for ELF binaries

container-guts

Last released

Easily export container guts (executables on the path).

smeagle

Last released

Fact generation for elf binaries with debug

opencontainers

Last released

Python module for oci specifications

watchme

Last released

reproducible monitoring client with exporters

qme

Last released

job submission and dashboard library

cssclean

Last released

remove un-used css from a file

pytest-github-report

Last released

Generate a GitHub report using pytest in GitHub Workflows

ohno

Last released

A command line client, wrapper, and Python module for formatting errors.

riverapi

Last released

Python client for interacting with online-ml river server

usrse

Last released

Python client for programmatic access to usrse events

paks

Last released

Interactive container commands.

singularity-tunel

Last released

commander and viewer to tunnel commands for HPC

schemaorg

Last released

Python functions for applied use of schema.org

symbolator-python

Last released

Assess compatibility of two binaries based on symbols.

puzzles

Last released

solve puzzles with Python

snakeface

Last released

Snakemake Interface

caliper

Last released

Caliper is a tool for measuring and assessing change in packages.

stools

Last released

Command line tools for container quality assurance

rseng

Last released

criteria and taxonomy for research software engineering

avt

Last released

AVT is the automated version tester to build reproducible environments

contributions-django

Last released

A GitHub style contributions graph for Django

openbases

Last released

openbases python helper functions for https://openbases.github.io

gridtest

Last released

generate grid testing for Python modules and functions

cdb

Last released

container database (cdb) metadata generation tool.

helpme

Last released

command line client for helping you out.

griznog

Last released

Your own personal Griznog, wisdom on demand

sourcecred

Last released

Python implementation of sourcecred

dinolemma

Last released

Simulate evolution of dinosaurs and avocado trees

codeart

Last released

Data visualizations with your own code.

markovmeme

Last released

Command line tool for generating markov memes.

juliart

Last released

Command line tool for generating Julia Set graphics and animations

nushell

Last released

Python module to easily create nushell plugins

freegenes

Last released

Command line python tool for working with FreeGenes.

singularity

Last released

command line tools for visualization and analysis of singularity containers.

containertree

Last released

Generate container trees

cognitiveatlas

Last released

python wrapper for the cognitive atlas (cognitiveatlas.org) RESTful API

sif

Last released

python handle for reading sif images

penrose

Last released

python API client to interact with penrose component packages

repofish

Last released

Command line tool for working with container storage

openschemas

Last released

openschemas python helper functions for schemaorg schemas

whedon

Last released

whedon python helper functions for https://openbases.github.io

containershare

Last released

library for working with containers, eventually will be goLang

pybraincompare

Last released

meta analysis and comparison for neuroimaging in python

tensorbayes

Last released

Deep Variational Inference in TensorFlow

som

Last released

stanford open modules for python

cftw

Last released

containers for the win is a module for container competitions

brainart

Last released

make images out of brain imaging data

facepalm

Last released

Generate smiley confusion matrices

pyneurovault

Last released

python wrapper for NeuroVault api

oscookie

Last released

Cookie cutter for generating random operating systems and software

wordfish

Last released

Infrastructure for finding relationships between terms in corpus of interest.

containeye

Last released

general visualization and comparison metrics for containers

ohbm

Last released

python api wrapper for the ohbm conference.

nidmviewer

Last released

command line or server tool to view or compare nidm results.

svgtools

Last released

components from images and data for interactive visualizations

expanalysis

Last released

thesis

Last released

ttoz

Last released

Convert a whole brain T score map to a Z score map without loss of precision for strongly positive and negative values.

artbrain

Last released

embed images into brain imaging data

visci

Last released

visualization standard file structure for continuous integration

deepdive

Last released

Standardizing inputs, outputs, and processing steps of DeepDive for a cloud deployment/tool

nidm

Last released

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