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81 projects

citelang

Last released

Credit parser and markdown language for scientific software.

snakedeploy

Last released

Deploy a snakemake pipeline from GitHub

pakages

Last released

GitHub packages package manager.

rse

Last released

tools for assessment and categorization of research software

compspec

Last released

Specification and model for describing and comparing things.

pipelib

Last released

A command line client and functions for collation.

ohno

Last released

A command line client, wrapper, and Python module for formatting errors.

singularity-hpc

Last released

Local registry intended for HPC using containers and system modules.

urlchecker

Last released

tool to collect and validate urls over static files (code and documentation)

spython

Last released

Command line python tool for working with singularity.

tributors

Last released

give tribute to your repository contributors.

django-river-ml

Last released

Online machine learning with river and Django.

riverapi

Last released

Python client for interacting with online-ml river server

deid

Last released

deidentify dicom and other images with python and pydicom

spliced

Last released

Emulate or predict splicing outcomes.

singularity-compose

Last released

simple orchestration for singularity containers

contributor-ci

Last released

automated tools to assess contributions.

usrse

Last released

Python client for programmatic access to usrse events

paks

Last released

Interactive container commands.

elfcall

Last released

generate callgraph data for ELF binaries

singularity-tunel

Last released

commander and viewer to tunnel commands for HPC

django-oci

Last released

Open Containers distribution API for Django

schemaorg

Last released

Python functions for applied use of schema.org

expfactory

Last released

software to generate a reproducible container battery of experiments.

symbolator-python

Last released

Assess compatibility of two binaries based on symbols.

puzzles

Last released

solve puzzles with Python

oras

Last released

OCI Registry as Storage Python client

snakeface

Last released

Snakemake Interface

caliper

Last released

Caliper is a tool for measuring and assessing change in packages.

stools

Last released

Command line tools for container quality assurance

sregistry

Last released

Command line tool for working with container storage

rseng

Last released

criteria and taxonomy for research software engineering

avt

Last released

AVT is the automated version tester to build reproducible environments

opencontainers

Last released

Python module for oci specifications

contributions-django

Last released

A GitHub style contributions graph for Django

openbases

Last released

openbases python helper functions for https://openbases.github.io

gridtest

Last released

generate grid testing for Python modules and functions

cdb

Last released

container database (cdb) metadata generation tool.

qme

Last released

job submission and dashboard library

helpme

Last released

command line client for helping you out.

pokemon

Last released

ascii database of pokemon... in python!

watchme

Last released

reproducible monitoring client with exporters

griznog

Last released

Your own personal Griznog, wisdom on demand

sourcecred

Last released

Python implementation of sourcecred

dinolemma

Last released

Simulate evolution of dinosaurs and avocado trees

scif

Last released

a filesystem organization for scientific software and metadata

codeart

Last released

Data visualizations with your own code.

markovmeme

Last released

Command line tool for generating markov memes.

juliart

Last released

Command line tool for generating Julia Set graphics and animations

nushell

Last released

Python module to easily create nushell plugins

freegenes

Last released

Command line python tool for working with FreeGenes.

singularity

Last released

command line tools for visualization and analysis of singularity containers.

containertree

Last released

Generate container trees

cognitiveatlas

Last released

python wrapper for the cognitive atlas (cognitiveatlas.org) RESTful API

sif

Last released

python handle for reading sif images

penrose

Last released

python API client to interact with penrose component packages

repofish

Last released

Command line tool for working with container storage

openschemas

Last released

openschemas python helper functions for schemaorg schemas

whedon

Last released

whedon python helper functions for https://openbases.github.io

containershare

Last released

library for working with containers, eventually will be goLang

pybraincompare

Last released

meta analysis and comparison for neuroimaging in python

tensorbayes

Last released

Deep Variational Inference in TensorFlow

som

Last released

stanford open modules for python

cftw

Last released

containers for the win is a module for container competitions

brainart

Last released

make images out of brain imaging data

facepalm

Last released

Generate smiley confusion matrices

pyneurovault

Last released

python wrapper for NeuroVault api

tunel

Last released

commander and viewer to tunnel commands for HPC

oscookie

Last released

Cookie cutter for generating random operating systems and software

wordfish

Last released

Infrastructure for finding relationships between terms in corpus of interest.

containeye

Last released

general visualization and comparison metrics for containers

ohbm

Last released

python api wrapper for the ohbm conference.

nidmviewer

Last released

command line or server tool to view or compare nidm results.

svgtools

Last released

components from images and data for interactive visualizations

expanalysis

Last released

thesis

Last released

ttoz

Last released

Convert a whole brain T score map to a Z score map without loss of precision for strongly positive and negative values.

artbrain

Last released

embed images into brain imaging data

visci

Last released

visualization standard file structure for continuous integration

deepdive

Last released

Standardizing inputs, outputs, and processing steps of DeepDive for a cloud deployment/tool

nidm

Last released

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