RNA visualization and graphical analysis toolset

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  • License Expression: MIT
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  • Author: Patrick Irving
  • Tags RNA , chemical probing , visualization , bioinformatics , structural biology
  • Requires: Python >=3.9
  • Provides-Extra: dev , docs
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Project description

RNAvigate

RNAvigate is a toolset to explore, compare, and visualize chemical probing data, structure models, and annotations between experimental samples.

For non-coders, RNAvigate is designed to be easy to learn. Reach out to me if you want help onboarding for your group. Using RNAvigate in a Jupyter Notebook will transform how you explore data, document thoughts, and share transparent and reproducible analyses.

For coders, RNAvigate is extremely flexible and a great package for scripting and standardizing plots and analyses as part of a bigger workflow.

Reach out

Coders and non-coders, reach out if you have any comments or issues at all! I love to help users and to learn how you are using this tool.

Please, use GitHub Issues liberally or email me. "Issues" can be:

  • a "dumb" question (my favorite kind) or a complicated one.
  • any comment or suggestion for the documentation or the code.
  • a cool thing that you did with RNAvigate.
  • a report of a bug or unclear error.
  • a request for help on acheiving a desired vizualization or analysis.
  • a request for advice on any chemical probing matter.

Project details

Verified details

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Project links
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Maintainers
Avatar for psirving from gravatar.com psirving

Unverified details

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  • License Expression: MIT
    SPDX License Expression
  • Author: Patrick Irving
  • Tags RNA , chemical probing , visualization , bioinformatics , structural biology
  • Requires: Python >=3.9
  • Provides-Extra: dev , docs
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1.1.2

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1.1.1

1.1.0

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