A small package for converting bacterial names into NCBI IDs
Project description
TaxSEA_in_python project
This package is a version of TaxSEA but build in python.
Installation
pip install TaxSEA_in_python
Usage
from TaxSEA_in_python import get_IDs
bacteria = ['Eubacterium_sp.', 'Ruminococcaceae_', 'Blautia_', 'Lactiplantibacillus_plantarum'] # Input must be a list.
# Converting bacterial names into NCBI ID
bacterial_ID = get_IDs.NCBI(bacteria)
# Finding the Taxons correspond to those bacterial names.
bacterial_taxon = get_IDs.Taxon(bacteria)
print(bacterial_taxon)
"""
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