arnie
Python API to compute RNA energetics and do structure prediction across multiple secondary structure packages.
Documentation
Install
arnie is available on PyPI.
pip install arnie
Repo Organization
src/arnie: source code for the arnie package.
docs: docsify-based markdown documentation for the arnie package.
tests: unit tests
notebooks: example jupyter notebooks with usage.
scripts: scripts for processing sequences in batch.
parameter_files: dir of various parameter files for packages, put here out of convenience.
(c) 2024 Leland Stanford Jr University Authors: Hannah Wayment-Steele
1 maintainer
Metadata
1 maintainer
Release files for arnie 0.2.7
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| arnie-0.2.7.tar.gz | 44.0 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| arnie-0.2.7-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 85.9 kB
Release files / arnie-0.2.7.tar.gz
| Download URL | arnie-0.2.7.tar.gz |
|---|---|
| Size | 44.0 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
5ba9b71a6545ba51113c549f5a73d0cd92c7562c6196dc15c41110e96fd9c84c
|
|
BLAKE2b-256 checksum How to use checksums |
39e90e25fd2064ce6cb6d58270fa67a51298344dc35e6275aa58e14c10688802
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.9
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on May 30, 2025.
Transparency logRelease files / arnie-0.2.7-py3-none-any.whl
| Download URL | arnie-0.2.7-py3-none-any.whl |
|---|---|
| Size | 41.8 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
bd86d31630239981302287868353b863d4eb3958db65a0a98e0ae424579baecb
|
|
BLAKE2b-256 checksum How to use checksums |
e6d24ac16255777b80a2887a19c06fd7cf30325cb8e1580d2132a16aef2d01cc
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.12.9
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on May 30, 2025.
Transparency log
