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Restoration inference and image-quality metrics for BioImageFlow

Project description

bioimageflow-restoration-tools

Tools for restoration inference, simple image-processing comparisons, and restoration metrics.

Tools

  • CAREamicsPredict: runs CAREamics restoration inference from a checkpoint.
  • RestoreImage: applies a simple image-processing restoration method.
  • RestorationMetrics: computes MSE, PSNR, and residual-noise measurements.
  • GaussianDenoise: applies Gaussian smoothing as a simple denoising method.
  • MedianDenoise: removes impulse noise with a dependency-light median filter.
  • BackgroundSubtract: subtracts a smoothed background estimate.
  • UnsharpMask: sharpens images by adding high-frequency residuals.
  • RichardsonLucyRestoration: runs Richardson-Lucy deconvolution.

Use the low-SNR restoration workflow in the main workflow catalog for a complete restoration example.

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